Information for 19-GAAGGTCAGAGAT (Motif 32)

T C A G T G C A T C G A C T A G C A T G A G C T T A G C C G T A T C A G C G T A T C A G C G T A A C G T
Reverse Opposite:
T G C A G A C T A G T C G C A T A G T C G C A T A T C G T C G A G T A C G A T C A G C T A C G T A G T C
p-value:1e-7
log p-value:-1.771e+01
Information Content per bp:1.540
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 21.8bp
Average Position of motif in Background39.4 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GAAGGTCAGAGAT--
-GAGGTCAAAGGTCA
 T C A G T G C A T C G A C T A G C A T G A G C T T A G C C G T A T C A G C G T A T C A G C G T A A C G T A C G T A C G T
A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GAAGGTCAGAGAT
-AAGGTCAC----
 T C A G T G C A T C G A C T A G C A T G A G C T T A G C C G T A T C A G C G T A T C A G C G T A A C G T
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GAAGGTCAGAGAT
CAAAGGTCAG----
 A C G T T C A G T G C A T C G A C T A G C A T G A G C T T A G C C G T A T C A G C G T A T C A G C G T A A C G T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGTCAGAGAT
TCAAGGTCAN----
 A C G T T C A G T G C A T C G A C T A G C A T G A G C T T A G C C G T A T C A G C G T A T C A G C G T A A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GAAGGTCAGAGAT--
AGGGGTCAGAGGTCA
 T C A G T G C A T C G A C T A G C A T G A G C T T A G C C G T A T C A G C G T A T C A G C G T A A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAAGGTCAGAGAT
TCAAGGTCAT----
 A C G T T C A G T G C A T C G A C T A G C A T G A G C T T A G C C G T A T C A G C G T A T C A G C G T A A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAAGGTCAGAGAT
TRAGGTCA-----
 T C A G T G C A T C G A C T A G C A T G A G C T T A G C C G T A T C A G C G T A T C A G C G T A A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GAAGGTCAGAGAT
ATCAAGGTCA-----
 A C G T A C G T T C A G T G C A T C G A C T A G C A T G A G C T T A G C C G T A T C A G C G T A T C A G C G T A A C G T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GAAGGTCAGAGAT
--AGGTCA-----
 T C A G T G C A T C G A C T A G C A T G A G C T T A G C C G T A T C A G C G T A T C A G C G T A A C G T
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAAGGTCAGAGAT
BTCAAGGTCA-----
 A C G T A C G T T C A G T G C A T C G A C T A G C A T G A G C T T A G C C G T A T C A G C G T A T C A G C G T A A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T