Information for 3-AAAGTCCAAAGGCMAH (Motif 3)

C T G A T G C A C T G A A C T G G C A T A T G C G A T C G C T A T C G A C T G A A C T G A C T G G T A C G T A C T C G A G T A C
Reverse Opposite:
C A T G A G C T C A T G A C T G T G A C T G A C A G C T A C G T C A G T C T A G T A C G C G T A G T A C A G C T A C G T G A C T
p-value:1e-20
log p-value:-4.828e+01
Information Content per bp:1.566
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif6.78%
Number of Background Sequences with motif567.9
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets44.9 +/- 23.7bp
Average Position of motif in Background48.6 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:AAAGTCCAAAGGCMAH
AGAGTCCAAAGTCCA-
 C T G A T G C A C T G A A C T G G C A T A T G C G A T C G C T A T C G A C T G A A C T G A C T G G T A C G T A C T C G A G T A C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-AAAGTCCAAAGGCMAH
CANAGNNCAAAGTCCA-
 A C G T C T G A T G C A C T G A A C T G G C A T A T G C G A T C G C T A T C G A C T G A A C T G A C T G G T A C G T A C T C G A G T A C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AAAGTCCAAAGGCMAH
AAAGATCAAAGG----
 C T G A T G C A C T G A A C T G G C A T A T G C G A T C G C T A T C G A C T G A A C T G A C T G G T A C G T A C T C G A G T A C
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AAAGTCCAAAGGCMAH
AAAGATCAAAGGGTT-
 C T G A T G C A C T G A A C T G G C A T A T G C G A T C G C T A T C G A C T G A A C T G A C T G G T A C G T A C T C G A G T A C
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AAAGTCCAAAGGCMAH
AAAGATCAAAGGAA--
 C T G A T G C A C T G A A C T G G C A T A T G C G A T C G C T A T C G A C T G A A C T G A C T G G T A C G T A C T C G A G T A C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AAAGTCCAAAGGCMAH
--ACATCAAAGGNA--
 C T G A T G C A C T G A A C T G G C A T A T G C G A T C G C T A T C G A C T G A A C T G A C T G G T A C G T A C T C G A G T A C
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AAAGTCCAAAGGCMAH
--ACATCAAAGG----
 C T G A T G C A C T G A A C T G G C A T A T G C G A T C G C T A T C G A C T G A A C T G A C T G G T A C G T A C T C G A G T A C
A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTCCAAAGGCMAH
NANAGATCAAAGGGNNN
 A C G T C T G A T G C A C T G A A C T G G C A T A T G C G A T C G C T A T C G A C T G A A C T G A C T G G T A C G T A C T C G A G T A C
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AAAGTCCAAAGGCMAH
--ACWTCAAAGG----
 C T G A T G C A C T G A A C T G G C A T A T G C G A T C G C T A T C G A C T G A A C T G A C T G G T A C G T A C T C G A G T A C
A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAAGTCCAAAGGCMAH-
AAAGGTCAAAGGTCAAC
 C T G A T G C A C T G A A C T G G C A T A T G C G A T C G C T A T C G A C T G A A C T G A C T G G T A C G T A C T C G A G T A C A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C