Information for 14-AAACACAAKYTGT (Motif 23)

C G T A G T C A G T C A A G T C C G T A G T A C C G T A C G T A A C T G G A C T A C G T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A C T G A G T A C A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G A T
p-value:1e-8
log p-value:-2.002e+01
Information Content per bp:1.838
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.0 +/- 23.9bp
Average Position of motif in Background42.1 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AAACACAAKYTGT
AAAGTAAACAAAAATT--
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A G T C A A G T C C G T A G T A C C G T A C G T A A C T G G A C T A C G T A C T G A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAACACAAKYTGT--
AAGAACATWHTGTTC
 C G T A G T C A G T C A A G T C C G T A G T A C C G T A C G T A A C T G G A C T A C G T A C T G A C G T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------AAACACAAKYTGT
CAAAAGTAAACAAAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A G T C A A G T C C G T A G T A C C G T A C G T A A C T G G A C T A C G T A C T G A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AAACACAAKYTGT
ATATCAAAACAAAACA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A G T C A A G T C C G T A G T A C C G T A C G T A A C T G G A C T A C G T A C T G A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAACACAAKYTGT--
VAGRACAKNCTGTBC
 C G T A G T C A G T C A A G T C C G T A G T A C C G T A C G T A A C T G G A C T A C G T A C T G A C G T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAACACAAKYTGT
AAACCACANN----
 A C G T C G T A G T C A G T C A A G T C C G T A G T A C C G T A C G T A A C T G G A C T A C G T A C T G A C G T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAACACAAKYTGT
GCAAAACATTACTA--
 A C G T A C G T A C G T C G T A G T C A G T C A A G T C C G T A G T A C C G T A C G T A A C T G G A C T A C G T A C T G A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAACACAAKYTGT
AAGTAAACAAA------
 A C G T A C G T A C G T A C G T C G T A G T C A G T C A A G T C C G T A G T A C C G T A C G T A A C T G G A C T A C G T A C T G A C G T
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAACACAAKYTGT--
VAGRACAKWCTGTYC
 C G T A G T C A G T C A A G T C C G T A G T A C C G T A C G T A A C T G G A C T A C G T A C T G A C G T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAACACAAKYTGT
CGAAGCACACAAAATA-
 A C G T A C G T A C G T A C G T C G T A G T C A G T C A A G T C C G T A G T A C C G T A C G T A A C T G G A C T A C G T A C T G A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T