Information for 3-CCACCAGGTGGCR (Motif 2)

G A T C A G T C G T C A T A G C T A G C G C T A A C T G T C A G A C G T A C T G C T A G G A T C T C G A
Reverse Opposite:
A G C T C T A G A G T C A G T C G T C A A G T C T A G C C G A T A C T G A T C G A C G T A C T G C T A G
p-value:1e-30
log p-value:-7.061e+01
Information Content per bp:1.656
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif6.64%
Number of Background Sequences with motif319.5
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets56.5 +/- 24.7bp
Average Position of motif in Background51.0 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGGTGGCR------
GCCASCAGGGGGCGCYVNNG
 A C G T G A T C A G T C G T C A T A G C T A G C G C T A A C T G T C A G A C G T A C T G C T A G G A T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---CCACCAGGTGGCR---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G A T C A G T C G T C A T A G C T A G C G C T A A C T G T C A G A C G T A C T G C T A G G A T C T C G A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---CCACCAGGTGGCR----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T G A T C A G T C G T C A T A G C T A G C G C T A A C T G T C A G A C G T A C T G C T A G G A T C T C G A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGGTGGCR
CCCCCCCGGGGGNN
 A C G T G A T C A G T C G T C A T A G C T A G C G C T A A C T G T C A G A C G T A C T G C T A G G A T C T C G A
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CCACCAGGTGGCR
NCCCCCCCGGGGGGN
 A C G T A C G T G A T C A G T C G T C A T A G C T A G C G C T A A C T G T C A G A C G T A C T G C T A G G A T C T C G A
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCACCAGGTGGCR
ACCCCCCCGGGGGGN
 A C G T A C G T G A T C A G T C G T C A T A G C T A G C G C T A A C T G T C A G A C G T A C T G C T A G G A T C T C G A
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCACCAGGTGGCR
ATCCAC---------
 A C G T A C G T G A T C A G T C G T C A T A G C T A G C G C T A A C T G T C A G A C G T A C T G C T A G G A T C T C G A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCACCAGGTGGCR
ACCACCTGTT----
 A C G T G A T C A G T C G T C A T A G C T A G C G C T A A C T G T C A G A C G T A C T G C T A G G A T C T C G A
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCACCAGGTGGCR
DCHCAGCAGGRGGCC
 A C G T A C G T G A T C A G T C G T C A T A G C T A G C G C T A A C T G T C A G A C G T A C T G C T A G G A T C T C G A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCACCAGGTGGCR
--AACAGATGGC-
 G A T C A G T C G T C A T A G C T A G C G C T A A C T G T C A G A C G T A C T G C T A G G A T C T C G A
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T