Information for 9-MWTTGTTCYMTAM (Motif 12)

G T A C C G T A A C G T A C G T A C T G A C G T A C G T A G T C A G C T G T A C A C G T G T C A G T C A
Reverse Opposite:
C A G T A C G T C G T A A C T G T C G A C T A G C G T A G T C A A G T C C G T A C G T A C G A T A C T G
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.833
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 23.2bp
Average Position of motif in Background37.0 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-MWTTGTTCYMTAM
TAATTGTTCTAAAC
 A C G T G T A C C G T A A C G T A C G T A C T G A C G T A C G T A G T C A G C T G T A C A C G T G T C A G T C A
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----MWTTGTTCYMTAM
NNTTTATTGTTCTNNN-
 A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C T G A C G T A C G T A G T C A G C T G T A C A C G T G T C A G T C A
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-MWTTGTTCYMTAM
YCTTTGTTCC----
 A C G T G T A C C G T A A C G T A C G T A C T G A C G T A C G T A G T C A G C T G T A C A C G T G T C A G T C A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:4
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----MWTTGTTCYMTAM
ANNTCTATTGTTCNNNA-
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C T G A C G T A C G T A G T C A G C T G T A C A C G T G T C A G T C A
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---MWTTGTTCYMTAM
TTCAATTGTTCTAAAA
 A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C T G A C G T A C G T A G T C A G C T G T A C A C G T G T C A G T C A
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-MWTTGTTCYMTAM
CCATTGTTNY----
 A C G T G T A C C G T A A C G T A C G T A C T G A C G T A C G T A G T C A G C T G T A C A C G T G T C A G T C A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----MWTTGTTCYMTAM
ANNTCCATTGTTCNNN--
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C T G A C G T A C G T A G T C A G C T G T A C A C G T G T C A G T C A
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----MWTTGTTCYMTAM
AANTTATTGTTCTNNA-
 A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C T G A C G T A C G T A G T C A G C T G T A C A C G T G T C A G T C A
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----MWTTGTTCYMTAM
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C T G A C G T A C G T A G T C A G C T G T A C A C G T G T C A G T C A
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--MWTTGTTCYMTAM
NCCATTGTTC-----
 A C G T A C G T G T A C C G T A A C G T A C G T A C T G A C G T A C G T A G T C A G C T G T A C A C G T G T C A G T C A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T