Information for 8-CHCTCTCTCTCTCTCT (Motif 25)

A G T C G C T A A G T C C A G T A G T C C G A T A T G C A C G T A G T C C G A T A G T C A G C T A G T C A G C T A G T C C G A T
Reverse Opposite:
C G T A C T A G C T G A A C T G C T G A A C T G C G T A A C T G C G T A A T C G C G T A A C T G G T C A A C T G C G A T A C T G
p-value:1e-3
log p-value:-8.926e+00
Information Content per bp:1.808
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.7 +/- 27.8bp
Average Position of motif in Background38.2 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CHCTCTCTCTCTCTCT
-TCACTTTCACTTTCN
 A G T C G C T A A G T C C A G T A G T C C G A T A T G C A C G T A G T C C G A T A G T C A G C T A G T C A G C T A G T C C G A T
A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CHCTCTCTCTCTCTCT
---ACTTTCACTTTC-
 A G T C G C T A A G T C C A G T A G T C C G A T A T G C A C G T A G T C C G A T A G T C A G C T A G T C A G C T A G T C C G A T
A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CHCTCTCTCTCTCTCT
---NCTGTCAATCAN-
 A G T C G C T A A G T C C A G T A G T C C G A T A T G C A C G T A G T C C G A T A G T C A G C T A G T C A G C T A G T C C G A T
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CHCTCTCTCTCTCTCT
CTGTCTGTCACCT---
 A G T C G C T A A G T C C A G T A G T C C G A T A T G C A C G T A G T C C G A T A G T C A G C T A G T C A G C T A G T C C G A T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CHCTCTCTCTCTCTCT
--GSCTGTCACTCA--
 A G T C G C T A A G T C C A G T A G T C C G A T A T G C A C G T A G T C C G A T A G T C A G C T A G T C A G C T A G T C C G A T
A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CHCTCTCTCTCTCTCT-
--ACCACTCTCGGTCAC
 A G T C G C T A A G T C C A G T A G T C C G A T A T G C A C G T A G T C C G A T A G T C A G C T A G T C A G C T A G T C C G A T A C G T
A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CHCTCTCTCTCTCTCT
---GCTGTTACCCT--
 A G T C G C T A A G T C C A G T A G T C C G A T A T G C A C G T A G T C C G A T A G T C A G C T A G T C A G C T A G T C C G A T
A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CHCTCTCTCTCTCTCT
----NCTTCCCGCCC-
 A G T C G C T A A G T C C A G T A G T C C G A T A T G C A C G T A G T C C G A T A G T C A G C T A G T C A G C T A G T C C G A T
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CHCTCTCTCTCTCTCT
-TGTCTGDCACCT---
 A G T C G C T A A G T C C A G T A G T C C G A T A T G C A C G T A G T C C G A T A G T C A G C T A G T C A G C T A G T C C G A T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CHCTCTCTCTCTCTCT
---ACTTTCACTTTC-
 A G T C G C T A A G T C C A G T A G T C C G A T A T G C A C G T A G T C C G A T A G T C A G C T A G T C A G C T A G T C C G A T
A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T