Information for 10-CYGYCTGCAMGWG (Motif 12)

A T G C A G C T A C T G A G T C A G T C A C G T A T C G A G T C C G T A T G C A T C A G C G A T A C T G
Reverse Opposite:
G T A C C G T A A G T C A C G T A C G T A C T G A T G C C G T A C T A G C T A G A G T C C T G A A T C G
p-value:1e-12
log p-value:-2.820e+01
Information Content per bp:1.800
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif36.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets45.1 +/- 20.9bp
Average Position of motif in Background48.1 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CYGYCTGCAMGWG
VBSYGTCTGG-----
 A C G T A C G T A T G C A G C T A C T G A G T C A G T C A C G T A T C G A G T C C G T A T G C A T C A G C G A T A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CYGYCTGCAMGWG
CTGTCTGG-----
 A T G C A G C T A C T G A G T C A G T C A C G T A T C G A G T C C G T A T G C A T C A G C G A T A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CYGYCTGCAMGWG
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A T G C A G C T A C T G A G T C A G T C A C G T A T C G A G T C C G T A T G C A T C A G C G A T A C T G
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CYGYCTGCAMGWG---
----SDGCAGGTGCNS
 A T G C A G C T A C T G A G T C A G T C A C G T A T C G A G T C C G T A T G C A T C A G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Id2/MA0617.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CYGYCTGCAMGWG-
------GCACGTGA
 A T G C A G C T A C T G A G T C A G T C A C G T A T C G A G T C C G T A T G C A T C A G C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CYGYCTGCAMGWG---
------KCACGTGMCN
 A T G C A G C T A C T G A G T C A G T C A C G T A T C G A G T C C G T A T G C A T C A G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CYGYCTGCAMGWG
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A T G C A G C T A C T G A G T C A G T C A C G T A T C G A G T C C G T A T G C A T C A G C G A T A C T G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Npas2/MA0626.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CYGYCTGCAMGWG--
-----GGCACGTGTC
 A T G C A G C T A C T G A G T C A G T C A C G T A T C G A G T C C G T A T G C A T C A G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

MTF1/MA0863.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CYGYCTGCAMGWG
GTGCCGTGTGCAAA--
 A C G T A C G T A C G T A T G C A G C T A C T G A G T C A G T C A C G T A T C G A G T C C G T A T G C A T C A G C G A T A C T G
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CYGYCTGCAMGWG-
------GCACGTGT
 A T G C A G C T A C T G A G T C A G T C A C G T A T C G A G T C C G T A T G C A T C A G C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T