Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-55 | -1.283e+02 | 0.0000 | 71.0 | 8.39% | 278.6 | 0.59% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-39 | -9.175e+01 | 0.0000 | 78.0 | 9.22% | 612.6 | 1.30% | motif file (matrix) |
svg |
3 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-37 | -8.585e+01 | 0.0000 | 107.0 | 12.65% | 1316.6 | 2.79% | motif file (matrix) |
svg |
4 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-37 | -8.582e+01 | 0.0000 | 82.0 | 9.69% | 748.2 | 1.58% | motif file (matrix) |
svg |
5 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-31 | -7.266e+01 | 0.0000 | 109.0 | 12.88% | 1595.0 | 3.37% | motif file (matrix) |
svg |
6 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-24 | -5.753e+01 | 0.0000 | 60.0 | 7.09% | 608.2 | 1.29% | motif file (matrix) |
svg |
7 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-24 | -5.568e+01 | 0.0000 | 51.0 | 6.03% | 443.9 | 0.94% | motif file (matrix) |
svg |
8 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-23 | -5.343e+01 | 0.0000 | 111.0 | 13.12% | 2090.7 | 4.42% | motif file (matrix) |
svg |
9 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-21 | -4.939e+01 | 0.0000 | 69.0 | 8.16% | 944.2 | 2.00% | motif file (matrix) |
svg |
10 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-21 | -4.885e+01 | 0.0000 | 65.0 | 7.68% | 850.4 | 1.80% | motif file (matrix) |
svg |
11 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-21 | -4.881e+01 | 0.0000 | 68.0 | 8.04% | 928.8 | 1.97% | motif file (matrix) |
svg |
12 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-20 | -4.758e+01 | 0.0000 | 68.0 | 8.04% | 950.9 | 2.01% | motif file (matrix) |
svg |
13 |
| E-box(bHLH)/Promoter/Homer | 1e-20 | -4.683e+01 | 0.0000 | 36.0 | 4.26% | 249.5 | 0.53% | motif file (matrix) |
svg |
14 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-20 | -4.657e+01 | 0.0000 | 93.0 | 10.99% | 1700.6 | 3.60% | motif file (matrix) |
svg |
15 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-20 | -4.635e+01 | 0.0000 | 73.0 | 8.63% | 1110.1 | 2.35% | motif file (matrix) |
svg |
16 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-19 | -4.578e+01 | 0.0000 | 33.0 | 3.90% | 208.3 | 0.44% | motif file (matrix) |
svg |
17 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-19 | -4.488e+01 | 0.0000 | 70.0 | 8.27% | 1056.6 | 2.24% | motif file (matrix) |
svg |
18 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-19 | -4.416e+01 | 0.0000 | 39.0 | 4.61% | 326.4 | 0.69% | motif file (matrix) |
svg |
19 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-18 | -4.368e+01 | 0.0000 | 79.0 | 9.34% | 1342.1 | 2.84% | motif file (matrix) |
svg |
20 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-18 | -4.348e+01 | 0.0000 | 92.0 | 10.87% | 1751.9 | 3.71% | motif file (matrix) |
svg |
21 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-18 | -4.211e+01 | 0.0000 | 101.0 | 11.94% | 2088.6 | 4.42% | motif file (matrix) |
svg |
22 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-17 | -4.086e+01 | 0.0000 | 172.0 | 20.33% | 4816.2 | 10.19% | motif file (matrix) |
svg |
23 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-17 | -4.083e+01 | 0.0000 | 42.0 | 4.96% | 423.2 | 0.90% | motif file (matrix) |
svg |
24 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-17 | -4.028e+01 | 0.0000 | 158.0 | 18.68% | 4278.1 | 9.05% | motif file (matrix) |
svg |
25 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-16 | -3.888e+01 | 0.0000 | 121.0 | 14.30% | 2911.4 | 6.16% | motif file (matrix) |
svg |
26 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-12 | -2.977e+01 | 0.0000 | 62.0 | 7.33% | 1172.7 | 2.48% | motif file (matrix) |
svg |
27 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-12 | -2.783e+01 | 0.0000 | 54.0 | 6.38% | 974.6 | 2.06% | motif file (matrix) |
svg |
28 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-11 | -2.616e+01 | 0.0000 | 32.0 | 3.78% | 395.2 | 0.84% | motif file (matrix) |
svg |
29 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.428e+01 | 0.0000 | 65.0 | 7.68% | 1443.9 | 3.05% | motif file (matrix) |
svg |
30 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-8 | -1.999e+01 | 0.0000 | 16.0 | 1.89% | 125.9 | 0.27% | motif file (matrix) |
svg |
31 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-8 | -1.906e+01 | 0.0000 | 59.0 | 6.97% | 1426.1 | 3.02% | motif file (matrix) |
svg |
32 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-7 | -1.807e+01 | 0.0000 | 17.0 | 2.01% | 164.5 | 0.35% | motif file (matrix) |
svg |
33 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-7 | -1.778e+01 | 0.0000 | 52.0 | 6.15% | 1224.1 | 2.59% | motif file (matrix) |
svg |
34 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-7 | -1.774e+01 | 0.0000 | 50.0 | 5.91% | 1154.7 | 2.44% | motif file (matrix) |
svg |
35 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-7 | -1.773e+01 | 0.0000 | 48.0 | 5.67% | 1084.4 | 2.29% | motif file (matrix) |
svg |
36 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-7 | -1.733e+01 | 0.0000 | 24.0 | 2.84% | 342.3 | 0.72% | motif file (matrix) |
svg |
37 |
| GFY(?)/Promoter/Homer | 1e-6 | -1.607e+01 | 0.0000 | 17.0 | 2.01% | 189.1 | 0.40% | motif file (matrix) |
svg |
38 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-6 | -1.528e+01 | 0.0000 | 55.0 | 6.50% | 1441.8 | 3.05% | motif file (matrix) |
svg |
39 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-6 | -1.523e+01 | 0.0000 | 60.0 | 7.09% | 1636.7 | 3.46% | motif file (matrix) |
svg |
40 |
| CRE(bZIP)/Promoter/Homer | 1e-6 | -1.449e+01 | 0.0000 | 34.0 | 4.02% | 716.1 | 1.52% | motif file (matrix) |
svg |
41 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-4 | -1.145e+01 | 0.0001 | 22.0 | 2.60% | 417.3 | 0.88% | motif file (matrix) |
svg |
42 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-4 | -1.123e+01 | 0.0001 | 40.0 | 4.73% | 1060.0 | 2.24% | motif file (matrix) |
svg |
43 |
| NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.114e+01 | 0.0001 | 31.0 | 3.66% | 731.2 | 1.55% | motif file (matrix) |
svg |
44 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.061e+01 | 0.0002 | 10.0 | 1.18% | 104.6 | 0.22% | motif file (matrix) |
svg |
45 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.042e+01 | 0.0002 | 128.0 | 15.13% | 5011.9 | 10.60% | motif file (matrix) |
svg |
46 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-4 | -1.004e+01 | 0.0003 | 34.0 | 4.02% | 888.8 | 1.88% | motif file (matrix) |
svg |
47 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-4 | -9.925e+00 | 0.0004 | 32.0 | 3.78% | 818.1 | 1.73% | motif file (matrix) |
svg |
48 |
| NRF(NRF)/Promoter/Homer | 1e-4 | -9.703e+00 | 0.0005 | 32.0 | 3.78% | 828.6 | 1.75% | motif file (matrix) |
svg |
49 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-4 | -9.348e+00 | 0.0006 | 106.0 | 12.53% | 4085.9 | 8.64% | motif file (matrix) |
svg |
50 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.960e+00 | 0.0009 | 32.0 | 3.78% | 863.5 | 1.83% | motif file (matrix) |
svg |
51 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -8.609e+00 | 0.0013 | 8.0 | 0.95% | 85.0 | 0.18% | motif file (matrix) |
svg |
52 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -8.161e+00 | 0.0020 | 50.0 | 5.91% | 1650.1 | 3.49% | motif file (matrix) |
svg |
53 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -7.769e+00 | 0.0029 | 4.0 | 0.47% | 19.7 | 0.04% | motif file (matrix) |
svg |
54 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-3 | -7.641e+00 | 0.0032 | 91.0 | 10.76% | 3565.7 | 7.54% | motif file (matrix) |
svg |
55 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.489e+00 | 0.0037 | 17.0 | 2.01% | 374.2 | 0.79% | motif file (matrix) |
svg |
56 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-3 | -7.478e+00 | 0.0037 | 45.0 | 5.32% | 1485.6 | 3.14% | motif file (matrix) |
svg |
57 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.115e+00 | 0.0052 | 34.0 | 4.02% | 1045.9 | 2.21% | motif file (matrix) |
svg |
58 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-3 | -7.038e+00 | 0.0055 | 13.0 | 1.54% | 255.9 | 0.54% | motif file (matrix) |
svg |
59 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-2 | -6.640e+00 | 0.0081 | 216.0 | 25.53% | 10001.5 | 21.16% | motif file (matrix) |
svg |
60 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.507e+00 | 0.0091 | 47.0 | 5.56% | 1649.8 | 3.49% | motif file (matrix) |
svg |
61 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -6.498e+00 | 0.0091 | 19.0 | 2.25% | 484.1 | 1.02% | motif file (matrix) |
svg |
62 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.306e+00 | 0.0107 | 38.0 | 4.49% | 1270.6 | 2.69% | motif file (matrix) |
svg |
63 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -6.119e+00 | 0.0127 | 89.0 | 10.52% | 3655.2 | 7.73% | motif file (matrix) |
svg |
64 |
| Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -6.100e+00 | 0.0128 | 13.0 | 1.54% | 284.4 | 0.60% | motif file (matrix) |
svg |
65 |
| ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.974e+00 | 0.0143 | 9.0 | 1.06% | 158.6 | 0.34% | motif file (matrix) |
svg |
66 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.959e+00 | 0.0143 | 37.0 | 4.37% | 1253.6 | 2.65% | motif file (matrix) |
svg |
67 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.787e+00 | 0.0167 | 72.0 | 8.51% | 2879.3 | 6.09% | motif file (matrix) |
svg |
68 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -5.678e+00 | 0.0183 | 75.0 | 8.87% | 3036.7 | 6.42% | motif file (matrix) |
svg |
69 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -5.637e+00 | 0.0188 | 52.0 | 6.15% | 1956.4 | 4.14% | motif file (matrix) |
svg |
70 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.499e+00 | 0.0213 | 62.0 | 7.33% | 2438.6 | 5.16% | motif file (matrix) |
svg |
71 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.402e+00 | 0.0231 | 45.0 | 5.32% | 1658.5 | 3.51% | motif file (matrix) |
svg |
72 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.301e+00 | 0.0252 | 6.0 | 0.71% | 86.6 | 0.18% | motif file (matrix) |
svg |
73 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-2 | -5.167e+00 | 0.0284 | 12.0 | 1.42% | 282.9 | 0.60% | motif file (matrix) |
svg |
74 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.106e+00 | 0.0298 | 9.0 | 1.06% | 181.8 | 0.38% | motif file (matrix) |
svg |
75 |
| E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.044e+00 | 0.0313 | 45.0 | 5.32% | 1693.0 | 3.58% | motif file (matrix) |
svg |
76 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.929e+00 | 0.0346 | 40.0 | 4.73% | 1475.7 | 3.12% | motif file (matrix) |
svg |
77 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-2 | -4.914e+00 | 0.0347 | 62.0 | 7.33% | 2508.3 | 5.31% | motif file (matrix) |
svg |
78 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -4.904e+00 | 0.0347 | 180.0 | 21.28% | 8481.2 | 17.94% | motif file (matrix) |
svg |
79 |
| NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-2 | -4.875e+00 | 0.0352 | 10.0 | 1.18% | 222.7 | 0.47% | motif file (matrix) |
svg |
80 |
| ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer | 1e-2 | -4.850e+00 | 0.0356 | 22.0 | 2.60% | 690.3 | 1.46% | motif file (matrix) |
svg |
81 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -4.824e+00 | 0.0361 | 21.0 | 2.48% | 650.1 | 1.38% | motif file (matrix) |
svg |
82 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-2 | -4.806e+00 | 0.0363 | 51.0 | 6.03% | 1998.5 | 4.23% | motif file (matrix) |
svg |
83 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -4.761e+00 | 0.0375 | 28.0 | 3.31% | 953.6 | 2.02% | motif file (matrix) |
svg |
84 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.679e+00 | 0.0403 | 37.0 | 4.37% | 1363.0 | 2.88% | motif file (matrix) |
svg |
85 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -4.672e+00 | 0.0403 | 39.0 | 4.61% | 1454.0 | 3.08% | motif file (matrix) |
svg |
86 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-2 | -4.654e+00 | 0.0403 | 14.0 | 1.65% | 378.8 | 0.80% | motif file (matrix) |
svg |
87 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-2 | -4.623e+00 | 0.0411 | 7.0 | 0.83% | 130.2 | 0.28% | motif file (matrix) |
svg |
88 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -4.622e+00 | 0.0411 | 27.0 | 3.19% | 920.9 | 1.95% | motif file (matrix) |
svg |
89 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-2 | -4.617e+00 | 0.0411 | 10.0 | 1.18% | 231.4 | 0.49% | motif file (matrix) |
svg |