Information for 8-CACCAGCCGGGAG (Motif 7)

A G T C C G T A A G T C A G T C C G T A A C T G A T G C A G T C C T A G A C T G A C T G G T C A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C A G T C A C T G A T C G A G T C A C G T A C T G A C T G A C G T A C T G
p-value:1e-13
log p-value:-3.075e+01
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.7 +/- 28.0bp
Average Position of motif in Background33.1 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CACCAGCCGGGAG
SNGCACCTGCHS----
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C T G A T G C A G T C C T A G A C T G A C T G G T C A A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CACCAGCCGGGAG
--CCAGACAG---
 A G T C C G T A A G T C A G T C C G T A A C T G A T G C A G T C C T A G A C T G A C T G G T C A A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACCAGCCGGGAG
TACACCTGTC-----
 A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C T G A T G C A G T C C T A G A C T G A C T G G T C A A C T G
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACCAGCCGGGAG
NNCACCTGNN-----
 A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C T G A T G C A G T C C T A G A C T G A C T G G T C A A C T G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACCAGCCGGGAG-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C T G A T G C A G T C C T A G A C T G A C T G G T C A A C T G A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CACCAGCCGGGAG
--CCAGACRSVB-
 A G T C C G T A A G T C A G T C C G T A A C T G A T G C A G T C C T A G A C T G A C T G G T C A A C T G
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CACCAGCCGGGAG
NCACCTGTN-----
 A C G T A G T C C G T A A G T C A G T C C G T A A C T G A T G C A G T C C T A G A C T G A C T G G T C A A C T G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CACCAGCCGGGAG
CGCACCTGCT-----
 A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C T G A T G C A G T C C T A G A C T G A C T G G T C A A C T G
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACCAGCCGGGAG
AACACCTGCT-----
 A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C T G A T G C A G T C C T A G A C T G A C T G G T C A A C T G
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACCAGCCGGGAG
-CACAGCAGGGGG
 A G T C C G T A A G T C A G T C C G T A A C T G A T G C A G T C C T A G A C T G A C T G G T C A A C T G
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G