Information for 13-AGTSMAGGGCTTC (Motif 13)

C G T A A C T G A C G T A T G C G T C A C T G A A C T G A C T G A T C G A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A T G C A G T C A G T C A G C T A C G T A T C G C G T A A G T C C G A T
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.915
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 21.6bp
Average Position of motif in Background56.8 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.62
Offset:8
Orientation:forward strand
Alignment:AGTSMAGGGCTTC-
--------GCTTCC
 C G T A A C T G A C G T A T G C G T C A C T G A A C T G A C T G A T C G A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGTSMAGGGCTTC
---CNAGGCCT--
 C G T A A C T G A C G T A T G C G T C A C T G A A C T G A C T G A T C G A G T C A C G T A C G T A G T C
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGTSMAGGGCTTC-
GGGTCAACGAGTTCA
 A C G T C G T A A C T G A C G T A T G C G T C A C T G A A C T G A C T G A T C G A G T C A C G T A C G T A G T C A C G T
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGTSMAGGGCTTC
-NTCAAGGTCA--
 C G T A A C T G A C G T A T G C G T C A C T G A A C T G A C T G A T C G A G T C A C G T A C G T A G T C
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGTSMAGGGCTTC
AGGTCAAGGTCA--
 A C G T C G T A A C T G A C G T A T G C G T C A C T G A A C T G A C T G A T C G A G T C A C G T A C G T A G T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGTSMAGGGCTTC
-TTCAAGGTCAT-
 C G T A A C T G A C G T A T G C G T C A C T G A A C T G A C T G A T C G A G T C A C G T A C G T A G T C
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGTSMAGGGCTTC---
NATTTAAGTACTTNAAA
 A C G T C G T A A C T G A C G T A T G C G T C A C T G A A C T G A C T G A T C G A G T C A C G T A C G T A G T C A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGTSMAGGGCTTC
---CTAGGCCT--
 C G T A A C T G A C G T A T G C G T C A C T G A A C T G A C T G A T C G A G T C A C G T A C G T A G T C
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGTSMAGGGCTTC---
TATTCAAGGTCATGCGA
 A C G T C G T A A C T G A C G T A T G C G T C A C T G A A C T G A C T G A T C G A G T C A C G T A C G T A G T C A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGTSMAGGGCTTC
-BTCAAGGTCA--
 C G T A A C T G A C G T A T G C G T C A C T G A A C T G A C T G A T C G A G T C A C G T A C G T A G T C
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T