Information for 3-CATTCATAGGGTT (Motif 6)

A G T C C G T A G A C T A C G T A G T C C T G A C G A T C T G A C T A G C A T G C T A G A G C T A C G T
Reverse Opposite:
T C G A T C G A A G T C G T A C G A T C A G C T C G T A A G C T T C A G T C G A C T G A A C G T A C T G
p-value:1e-130
log p-value:-2.993e+02
Information Content per bp:1.778
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif11.38%
Number of Background Sequences with motif53.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets52.3 +/- 27.2bp
Average Position of motif in Background42.9 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CATTCATAGGGTT
GACCACATTCATACAAT-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G A C T A C G T A G T C C T G A C G A T C T G A C T A G C A T G C T A G A G C T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATTCATAGGGTT
AACAATGGTAGTGTT
 A C G T A C G T A G T C C G T A G A C T A C G T A G T C C T G A C G A T C T G A C T A G C A T G C T A G A G C T A C G T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CATTCATAGGGTT
NNCATTCATTCATNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G A C T A C G T A G T C C T G A C G A T C T G A C T A G C A T G C T A G A G C T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CATTCATAGGGTT
AACAATGNTATTGTT
 A C G T A C G T A G T C C G T A G A C T A C G T A G T C C T G A C G A T C T G A C T A G C A T G C T A G A G C T A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CATTCATAGGGTT
ACATTCATGACACG
 A C G T A G T C C G T A G A C T A C G T A G T C C T G A C G A T C T G A C T A G C A T G C T A G A G C T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

HLTF/MA0109.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CATTCATAGGGTT
---NNATAAGGNN
 A G T C C G T A G A C T A C G T A G T C C T G A C G A T C T G A C T A G C A T G C T A G A G C T A C G T
A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

BHLHE23/MA0817.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CATTCATAGGGTT
-AAACATATGTTT
 A G T C C G T A G A C T A C G T A G T C C T G A C G A T C T G A C T A G C A T G C T A G A G C T A C G T
A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

SOX4/MA0867.1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CATTCATAGGGTT
GAACAATTGCAGTGTT
 A C G T A C G T A C G T A G T C C G T A G A C T A C G T A G T C C T G A C G A T C T G A C T A G C A T G C T A G A G C T A C G T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

OLIG2/MA0678.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CATTCATAGGGTT
--ACCATATGGT-
 A G T C C G T A G A C T A C G T A G T C C T G A C G A T C T G A C T A G C A T G C T A G A G C T A C G T
A C G T A C G T C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CATTCATAGGGTT
--ANCATATGGT-
 A G T C C G T A G A C T A C G T A G T C C T G A C G A T C T G A C T A G C A T G C T A G A G C T A C G T
A C G T A C G T C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T