Information for 16-GSCAAAGTGT (Motif 38)

C T A G T A C G A G T C G T C A C G T A C T G A A T C G A C G T A C T G A G C T
Reverse Opposite:
T C G A A G T C C G T A A T G C A G C T A C G T A C G T A C T G A T G C A G T C
p-value:1e-6
log p-value:-1.461e+01
Information Content per bp:1.794
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif200.4
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets55.6 +/- 24.1bp
Average Position of motif in Background50.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GSCAAAGTGT--
--TTRAGTGSYK
 C T A G T A C G A G T C G T C A C G T A C T G A A T C G A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GSCAAAGTGT----
CGACCAACTGCCGTG
 A C G T C T A G T A C G A G T C G T C A C G T A C T G A A T C G A C G T A C T G A G C T A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GSCAAAGTGT
--TTAAGTGC
 C T A G T A C G A G T C G T C A C G T A C T G A A T C G A C G T A C T G A G C T
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GSCAAAGTGT-----
CGACCAACTGCCATGC
 A C G T C T A G T A C G A G T C G T C A C G T A C T G A A T C G A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GSCAAAGTGT-
--TTAAGTGGN
 C T A G T A C G A G T C G T C A C G T A C T G A A T C G A C G T A C T G A G C T A C G T
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GSCAAAGTGT-
-NTCAAGTGGN
 C T A G T A C G A G T C G T C A C G T A C T G A A T C G A C G T A C T G A G C T A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GSCAAAGTGT-
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T C T A G T A C G A G T C G T C A C G T A C T G A A T C G A C G T A C T G A G C T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GSCAAAGTGT
CGTGCCAAG----
 A C G T A C G T A C G T C T A G T A C G A G T C G T C A C G T A C T G A A T C G A C G T A C T G A G C T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GSCAAAGTGT-
--TTAAGTGGT
 C T A G T A C G A G T C G T C A C G T A C T G A A T C G A C G T A C T G A G C T A C G T
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GSCAAAGTGT--
----AGGTGTCA
 C T A G T A C G A G T C G T C A C G T A C T G A A T C G A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A