Information for 22-GGAGTTTGATTBTVHT (Motif 33)

A T C G T C A G C G T A A C T G C G A T A C G T A C G T A C T G C G T A A G C T A C G T A G T C A C G T T C G A G C T A A C G T
Reverse Opposite:
C G T A C G A T A C G T C G T A T A C G G T C A C T G A C G A T G T A C C G T A G T C A C G T A A G T C A C G T A G T C T A G C
p-value:1e-7
log p-value:-1.794e+01
Information Content per bp:1.754
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.4 +/- 30.1bp
Average Position of motif in Background57.6 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTTTGATTBTVHT
NTNAATTTTATTGNATT
 A C G T A T C G T C A G C G T A A C T G C G A T A C G T A C G T A C T G C G T A A G C T A C G T A G T C A C G T T C G A G C T A A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGAGTTTGATTBTVHT
----TTTAAT------
 A T C G T C A G C G T A A C T G C G A T A C G T A C G T A C T G C G T A A G C T A C G T A G T C A C G T T C G A G C T A A C G T
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGAGTTTGATTBTVHT
TCAGTTTCATTTTCC-
 A T C G T C A G C G T A A C T G C G A T A C G T A C G T A C T G C G T A A G C T A C G T A G T C A C G T T C G A G C T A A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGAGTTTGATTBTVHT
--AGTTTCAGTTTC--
 A T C G T C A G C G T A A C T G C G A T A C G T A C G T A C T G C G T A A G C T A C G T A G T C A C G T T C G A G C T A A C G T
A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGAGTTTGATTBTVHT
--AGTTTCAKTTTC--
 A T C G T C A G C G T A A C T G C G A T A C G T A C G T A C T G C G T A A G C T A C G T A G T C A C G T T C G A G C T A A C G T
A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGAGTTTGATTBTVHT
NNANTTTTATTGGNNN
 A T C G T C A G C G T A A C T G C G A T A C G T A C G T A C T G C G T A A G C T A C G T A G T C A C G T T C G A G C T A A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGAGTTTGATTBTVHT
NNAATTTTATTGGNTN
 A T C G T C A G C G T A A C T G C G A T A C G T A C G T A C T G C G T A A G C T A C G T A G T C A C G T T C G A G C T A A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGAGTTTGATTBTVHT
NGANTTTTATGGCTCN
 A T C G T C A G C G T A A C T G C G A T A C G T A C G T A C T G C G T A A G C T A C G T A G T C A C G T T C G A G C T A A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGAGTTTGATTBTVHT---
-NAGTTTCABTHTGACTNW
 A T C G T C A G C G T A A C T G C G A T A C G T A C G T A C T G C G T A A G C T A C G T A G T C A C G T T C G A G C T A A C G T A C G T A C G T A C G T
A C G T A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

PH0013.1_Cdx2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGAGTTTGATTBTVHT-
-NAATTTTATTACCNNN
 A T C G T C A G C G T A A C T G C G A T A C G T A C G T A C T G C G T A A G C T A C G T A G T C A C G T T C G A G C T A A C G T A C G T
A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T