Information for 2-CCACATTCWTTACATT (Motif 3)

A G T C T A G C C T G A G A T C C G T A A G C T C G A T A T G C G C T A A G C T A G C T C T G A A G T C C G T A G C A T C A G T
Reverse Opposite:
G T C A C G T A C G A T A C T G A G C T T C G A T C G A C G A T A T C G C G T A C T G A A C G T C T A G A G C T A C T G T C A G
p-value:1e-162
log p-value:-3.752e+02
Information Content per bp:1.733
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif13.80%
Number of Background Sequences with motif57.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets49.6 +/- 24.8bp
Average Position of motif in Background51.7 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCACATTCWTTACATT
GACCACATTCATACAAT-
 A C G T A C G T A G T C T A G C C T G A G A T C C G T A A G C T C G A T A T G C G C T A A G C T A G C T C T G A A G T C C G T A G C A T C A G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCACATTCWTTACATT
--ACATTCATGACACG
 A G T C T A G C C T G A G A T C C G T A A G C T C G A T A T G C G C T A A G C T A G C T C T G A A G T C C G T A G C A T C A G T
A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

TEAD1/MA0090.2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCACATTCWTTACATT
-CACATTCCAT-----
 A G T C T A G C C T G A G A T C C G T A A G C T C G A T A T G C G C T A A G C T A G C T C T G A A G T C C G T A G C A T C A G T
A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCACATTCWTTACATT
-CACATTCCAT-----
 A G T C T A G C C T G A G A T C C G T A A G C T C G A T A T G C G C T A A G C T A G C T C T G A A G T C C G T A G C A T C A G T
A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCACATTCWTTACATT
ACCACATCCTGT-----
 A C G T A G T C T A G C C T G A G A T C C G T A A G C T C G A T A T G C G C T A A G C T A G C T C T G A A G T C C G T A G C A T C A G T
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCACATTCWTTACATT
NWAACCACADNN--------
 A C G T A C G T A C G T A C G T A G T C T A G C C T G A G A T C C G T A A G C T C G A T A T G C G C T A A G C T A G C T C T G A A G T C C G T A G C A T C A G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCACATTCWTTACATT--
-NNNTTTGTTTACATTTN
 A G T C T A G C C T G A G A T C C G T A A G C T C G A T A T G C G C T A A G C T A G C T C T G A A G T C C G T A G C A T C A G T A C G T A C G T
A C G T T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCACATTCWTTACATT--
-NNNTTTGTTTACATTTN
 A G T C T A G C C T G A G A T C C G T A A G C T C G A T A T G C G C T A A G C T A G C T C T G A A G T C C G T A G C A T C A G T A C G T A C G T
A C G T T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0019.1_Foxl1_1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCACATTCWTTACATT--
-NNNTTTGTTTACATTTN
 A G T C T A G C C T G A G A T C C G T A A G C T C G A T A T G C G C T A A G C T A G C T C T G A A G T C C G T A G C A T C A G T A C G T A C G T
A C G T T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCACATTCWTTACATT
--ACATTCCA------
 A G T C T A G C C T G A G A T C C G T A A G C T C G A T A T G C G C T A A G C T A G C T C T G A A G T C C G T A G C A T C A G T
A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T