Information for 20-ACCCTTGCCTTAC (Motif 29)

C G T A A T G C G T A C A G T C C G A T A C G T C T A G A G T C A G T C A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T G T C A C G T A A C T G A C T G A G T C G T C A C G T A C T A G A C T G A T C G A C G T
p-value:1e-8
log p-value:-1.904e+01
Information Content per bp:1.829
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 24.0bp
Average Position of motif in Background75.2 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACCCTTGCCTTAC
NNACTTGCCTT--
 C G T A A T G C G T A C A G T C C G A T A C G T C T A G A G T C A G T C A C G T A C G T C G T A A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:ACCCTTGCCTTAC
----TGACCTYA-
 C G T A A T G C G T A C A G T C C G A T A C G T C T A G A G T C A G T C A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACCCTTGCCTTAC--
TGACCTTTGCATGACCT
 A C G T A C G T C G T A A T G C G T A C A G T C C G A T A C G T C T A G A G T C A G T C A C G T A C G T C G T A A G T C A C G T A C G T
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACCCTTGCCTTAC
--BNTGDCCTTG-
 C G T A A T G C G T A C A G T C C G A T A C G T C T A G A G T C A G T C A C G T A C G T C G T A A G T C
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACCCTTGCCTTAC
NNACTTACCTN--
 C G T A A T G C G T A C A G T C C G A T A C G T C T A G A G T C A G T C A C G T A C G T C G T A A G T C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACCCTTGCCTTAC
TGACCTTGACCT---
 A C G T A C G T C G T A A T G C G T A C A G T C C G A T A C G T C T A G A G T C A G T C A C G T A C G T C G T A A G T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACCCTTGCCTTAC
---GTGACCTT--
 C G T A A T G C G T A C A G T C C G A T A C G T C T A G A G T C A G T C A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACCCTTGCCTTAC
TGACCTTGACCT---
 A C G T A C G T C G T A A T G C G T A C A G T C C G A T A C G T C T A G A G T C A G T C A C G T A C G T C G T A A G T C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACCCTTGCCTTAC
TGACCTTTGCCCTAN
 A C G T A C G T C G T A A T G C G T A C A G T C C G A T A C G T C T A G A G T C A G T C A C G T A C G T C G T A A G T C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACCCTTGCCTTAC
TGACCTTTGCCCTA-
 A C G T A C G T C G T A A T G C G T A C A G T C C G A T A C G T C T A G A G T C A G T C A C G T A C G T C G T A A G T C
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T