Information for 20-GAATCTGTGCAMAGAT (Motif 28)

C T A G G T C A G C T A A C G T G A T C A G C T A T C G A C G T T A C G A G T C G C T A T G A C T C G A C T A G C G T A C A G T
Reverse Opposite:
G C T A C G A T A G T C A C G T A C T G C G A T C T A G A G T C C G T A T A G C C T G A C A T G G T C A C A G T A C G T G A T C
p-value:1e-8
log p-value:-1.930e+01
Information Content per bp:1.673
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif63.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets44.5 +/- 23.8bp
Average Position of motif in Background49.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAATCTGTGCAMAGAT--
-TACATGTGCACATAAAA
 C T A G G T C A G C T A A C G T G A T C A G C T A T C G A C G T T A C G A G T C G C T A T G A C T C G A C T A G C G T A C A G T A C G T A C G T
A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAATCTGTGCAMAGAT-
NNGTATGTGCACATNNN
 C T A G G T C A G C T A A C G T G A T C A G C T A T C G A C G T T A C G A G T C G C T A T G A C T C G A C T A G C G T A C A G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAATCTGTGCAMAGAT
AAATCACTGC------
 C T A G G T C A G C T A A C G T G A T C A G C T A T C G A C G T T A C G A G T C G C T A T G A C T C G A C T A G C G T A C A G T
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAATCTGTGCAMAGAT
AAATCACAGCA-----
 C T A G G T C A G C T A A C G T G A T C A G C T A T C G A C G T T A C G A G T C G C T A T G A C T C G A C T A G C G T A C A G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAATCTGTGCAMAGAT
GGGCCGTGTGCAAAAA-
 A C G T C T A G G T C A G C T A A C G T G A T C A G C T A T C G A C G T T A C G A G T C G C T A T G A C T C G A C T A G C G T A C A G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GAATCTGTGCAMAGAT-
NNNVCTGWGYAAACASN
 C T A G G T C A G C T A A C G T G A T C A G C T A T C G A C G T T A C G A G T C G C T A T G A C T C G A C T A G C G T A C A G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAATCTGTGCAMAGAT--
---CAATTGCAAAAATAT
 C T A G G T C A G C T A A C G T G A T C A G C T A T C G A C G T T A C G A G T C G C T A T G A C T C G A C T A G C G T A C A G T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GAATCTGTGCAMAGAT--
-AAAATATGCATAATAAA
 C T A G G T C A G C T A A C G T G A T C A G C T A T C G A C G T T A C G A G T C G C T A T G A C T C G A C T A G C G T A C A G T A C G T A C G T
A C G T G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GAATCTGTGCAMAGAT
----CTGTTCCTGG--
 C T A G G T C A G C T A A C G T G A T C A G C T A T C G A C G T T A C G A G T C G C T A T G A C T C G A C T A G C G T A C A G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:GAATCTGTGCAMAGAT-
-------TGCCCAGNHW
 C T A G G T C A G C T A A C G T G A T C A G C T A T C G A C G T T A C G A G T C G C T A T G A C T C G A C T A G C G T A C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A