Information for 18-HAATCAAAACCDT (Motif 25)

G C T A C G T A C G T A C G A T A G T C C G T A C G T A C G T A C G T A A G T C G T A C C G T A A C G T
Reverse Opposite:
C G T A G C A T C A T G A C T G A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T C A G T
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.857
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 19.0bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0035.1_Irf5_1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--HAATCAAAACCDT
ATAAACCGAAACCAA
 A C G T A C G T G C T A C G T A C G T A C G A T A G T C C G T A C G T A C G T A C G T A A G T C G T A C C G T A A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-HAATCAAAACCDT---
AACACCAAAACAAAGGA
 A C G T G C T A C G T A C G T A C G A T A G T C C G T A C G T A C G T A C G T A A G T C G T A C C G T A A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-HAATCAAAACCDT
CCAATCAA------
 A C G T G C T A C G T A C G T A C G A T A G T C C G T A C G T A C G T A C G T A A G T C G T A C C G T A A C G T
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--HAATCAAAACCDT
CAAAATCGAAACTAA
 A C G T A C G T G C T A C G T A C G T A C G A T A G T C C G T A C G T A C G T A C G T A A G T C G T A C C G T A A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----HAATCAAAACCDT
ATATCAAAACAAAACA--
 A C G T A C G T A C G T A C G T A C G T G C T A C G T A C G T A C G A T A G T C C G T A C G T A C G T A C G T A A G T C G T A C C G T A A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-HAATCAAAACCDT-
CGTATCGAAACCAAA
 A C G T G C T A C G T A C G T A C G A T A G T C C G T A C G T A C G T A C G T A A G T C G T A C C G T A A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--HAATCAAAACCDT
GAGAACCGAAACTG-
 A C G T A C G T G C T A C G T A C G T A C G A T A G T C C G T A C G T A C G T A C G T A A G T C G T A C C G T A A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-HAATCAAAACCDT---
CTGATCGAAACCAAAGT
 A C G T G C T A C G T A C G T A C G A T A G T C C G T A C G T A C G T A C G T A A G T C G T A C C G T A A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:HAATCAAAACCDT
--ATTAAA-----
 G C T A C G T A C G T A C G A T A G T C C G T A C G T A C G T A C G T A A G T C G T A C C G T A A C G T
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------HAATCAAAACCDT
CAAAAGTAAACAAAG----
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A C G T A C G A T A G T C C G T A C G T A C G T A C G T A A G T C G T A C C G T A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T