Information for 18-TGAAATTTAATTYTAC (Motif 22)

C G A T C T A G C G T A G T C A C G T A C G A T A G C T C A G T T C G A C G T A C G A T A C G T G A T C G A C T C G T A G A T C
Reverse Opposite:
C T A G G A C T C G T A C T A G T G C A G C T A G C A T A G C T G C T A T C G A G C T A A C G T A C G T C G A T G A T C G C T A
p-value:1e-9
log p-value:-2.126e+01
Information Content per bp:1.647
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif184.7
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets55.8 +/- 25.9bp
Average Position of motif in Background44.0 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROP1/MA0715.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGAAATTTAATTYTAC
--TAATTTAATTA---
 C G A T C T A G C G T A G T C A C G T A C G A T A G C T C A G T T C G A C G T A C G A T A C G T G A T C G A C T C G T A G A T C
A C G T A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGAAATTTAATTYTAC
--TAATTTAATTA---
 C G A T C T A G C G T A G T C A C G T A C G A T A G C T C A G T T C G A C G T A C G A T A C G T G A T C G A C T C G T A G A T C
A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGAAATTTAATTYTAC
-NTAATBNAATTA---
 C G A T C T A G C G T A G T C A C G T A C G A T A G C T C A G T T C G A C G T A C G A T A C G T G A T C G A C T C G T A G A T C
A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGAAATTTAATTYTAC
--TAATTTAATTA---
 C G A T C T A G C G T A G T C A C G T A C G A T A G C T C A G T T C G A C G T A C G A T A C G T G A T C G A C T C G T A G A T C
A C G T A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGAAATTTAATTYTAC
--TAATYNRATTAR--
 C G A T C T A G C G T A G T C A C G T A C G A T A G C T C A G T T C G A C G T A C G A T A C G T G A T C G A C T C G T A G A T C
A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGAAATTTAATTYTAC
TNGAATTTCATTNAN-
 C G A T C T A G C G T A G T C A C G T A C G A T A G C T C A G T T C G A C G T A C G A T A C G T G A T C G A C T C G T A G A T C
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGAAATTTAATTYTAC
GATTAATTAATTT---
 C G A T C T A G C G T A G T C A C G T A C G A T A G C T C A G T T C G A C G T A C G A T A C G T G A T C G A C T C G T A G A T C
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGAAATTTAATTYTAC
AATCAATTCAATAATT-
 A C G T C G A T C T A G C G T A G T C A C G T A C G A T A G C T C A G T T C G A C G T A C G A T A C G T G A T C G A C T C G T A G A T C
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGAAATTTAATTYTAC
-GWAAYHTGAKMC---
 C G A T C T A G C G T A G T C A C G T A C G A T A G C T C A G T T C G A C G T A C G A T A C G T G A T C G A C T C G T A G A T C
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGAAATTTAATTYTAC--
-GAAAATTAATTACTTCG
 C G A T C T A G C G T A G T C A C G T A C G A T A G C T C A G T T C G A C G T A C G A T A C G T G A T C G A C T C G T A G A T C A C G T A C G T
A C G T C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G