Information for 15-TTYAGAACAGTGA (Motif 20)

A C G T A C G T G A C T C G T A A T C G G T C A G T C A G T A C C G T A A C T G C G A T A C T G C T G A
Reverse Opposite:
A G C T G T A C C G T A A G T C C G A T A C T G A C G T A C G T T A G C C G A T C T G A C G T A C G T A
p-value:1e-9
log p-value:-2.235e+01
Information Content per bp:1.764
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.7 +/- 21.1bp
Average Position of motif in Background39.9 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTYAGAACAGTGA
NTTNAGAACAATTA
 A C G T A C G T A C G T G A C T C G T A A T C G G T C A G T C A G T A C C G T A A C T G C G A T A C T G C T G A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTYAGAACAGTGA--
NNTNANAACAATTNNA
 A C G T A C G T A C G T G A C T C G T A A T C G G T C A G T C A G T A C C G T A A C T G C G A T A C T G C T G A A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTYAGAACAGTGA---
TTTAGAACAATAAAAT
 A C G T A C G T G A C T C G T A A T C G G T C A G T C A G T A C C G T A A C T G C G A T A C T G C T G A A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTYAGAACAGTGA---
TTAAGAACAATAAATT
 A C G T A C G T G A C T C G T A A T C G G T C A G T C A G T A C C G T A A C T G C G A T A C T G C T G A A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTYAGAACAGTGA---
NNNNTGCCAGTGATTG
 A C G T A C G T G A C T C G T A A T C G G T C A G T C A G T A C C G T A A C T G C G A T A C T G C T G A A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TTYAGAACAGTGA----
ATAAGAACAAAGGACTA
 A C G T A C G T G A C T C G T A A T C G G T C A G T C A G T A C C G T A A C T G C G A T A C T G C T G A A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TTYAGAACAGTGA
-----CACAGN--
 A C G T A C G T G A C T C G T A A T C G G T C A G T C A G T A C C G T A A C T G C G A T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TTYAGAACAGTGA
TATCATTAGAACGCT--
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A T C G G T C A G T C A G T A C C G T A A C T G C G A T A C T G C T G A
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTYAGAACAGTGA----
TNNAGAACAATANATNN
 A C G T A C G T G A C T C G T A A T C G G T C A G T C A G T A C C G T A A C T G C G A T A C T G C T G A A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TTYAGAACAGTGA-
----GAACAATGGN
 A C G T A C G T G A C T C G T A A T C G G T C A G T C A G T A C C G T A A C T G C G A T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G