Information for 1-TCTCTCCAGTRTG (Motif 2)

A C G T A G T C G C A T G A T C C G A T A G T C G T A C G C T A A C T G G A C T T C G A A C G T A C T G
Reverse Opposite:
T A G C C G T A A G C T C G T A A G T C C G A T A C T G C T A G G C T A C T A G C G T A C T A G G T C A
p-value:1e-167
log p-value:-3.850e+02
Information Content per bp:1.740
Number of Target Sequences with motif99.0
Percentage of Target Sequences with motif14.08%
Number of Background Sequences with motif58.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets48.5 +/- 28.6bp
Average Position of motif in Background46.5 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TCTCTCCAGTRTG-
------CTGTCTGG
 A C G T A G T C G C A T G A T C C G A T A G T C G T A C G C T A A C T G G A C T T C G A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTCCAGTRTG--
NNNNTGCCAGTGATTG
 A C G T A C G T A G T C G C A T G A T C C G A T A G T C G T A C G C T A A C T G G A C T T C G A A C G T A C T G A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

GFX(?)/Promoter/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TCTCTCCAGTRTG
TCTCGCGAGAAT-
 A C G T A G T C G C A T G A T C C G A T A G T C G T A C G C T A A C T G G A C T T C G A A C G T A C T G
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TCTCTCCAGTRTG-
----VBSYGTCTGG
 A C G T A G T C G C A T G A T C C G A T A G T C G T A C G C T A A C T G G A C T T C G A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TCTCTCCAGTRTG----
TGTTCCCATTGTGTACT
 A C G T A G T C G C A T G A T C C G A T A G T C G T A C G C T A A C T G G A C T T C G A A C G T A C T G A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTCCAGTRTG
ATCACCCCAT----
 A C G T A C G T A G T C G C A T G A T C C G A T A G T C G T A C G C T A A C T G G A C T T C G A A C G T A C T G
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCCAGTRTG
ATCACCCCAT----
 A C G T A C G T A G T C G C A T G A T C C G A T A G T C G T A C G C T A A C T G G A C T T C G A A C G T A C T G
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TCTCTCCAGTRTG
---DCTCAGCAGG
 A C G T A G T C G C A T G A T C C G A T A G T C G T A C G C T A A C T G G A C T T C G A A C G T A C T G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

T/MA0009.2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TCTCTCCAGTRTG---
TCACACCTAGGTGTGA
 A C G T A G T C G C A T G A T C C G A T A G T C G T A C G C T A A C T G G A C T T C G A A C G T A C T G A C G T A C G T A C G T
G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TCTCTCCAGTRTG------
--NNTNNTGTCTGGNNTNG
 A C G T A G T C G C A T G A T C C G A T A G T C G T A C G C T A A C T G G A C T T C G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G