Information for 13-RCAWKTAWCTGCT (Motif 18)

C T A G G T A C C G T A C G T A A C T G A C G T C G T A C G T A G T A C A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C T G C G A T A C G T C G T A G T A C C G A T A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.4 +/- 24.4bp
Average Position of motif in Background63.8 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:RCAWKTAWCTGCT-
----NHAACBGYYV
 C T A G G T A C C G T A C G T A A C T G A C G T C G T A C G T A G T A C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

Hmx1/MA0896.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RCAWKTAWCTGCT---
ANNCATTAATTGCTNGN
 A C G T C T A G G T A C C G T A C G T A A C T G A C G T C G T A C G T A G T A C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RCAWKTAWCTGCT---
ANNCATTAATTGCTNGN
 A C G T C T A G G T A C C G T A C G T A A C T G A C G T C G T A C G T A G T A C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RCAWKTAWCTGCT---
ATTNNTTAATTGCTTGT
 A C G T C T A G G T A C C G T A C G T A A C T G A C G T C G T A C G T A G T A C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RCAWKTAWCTGCT---
ATTNNTTAATTGCTTGT
 A C G T C T A G G T A C C G T A C G T A A C T G A C G T C G T A C G T A G T A C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:RCAWKTAWCTGCT
----TTAAGTGC-
 C T A G G T A C C G T A C G T A A C T G A C G T C G T A C G T A G T A C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----RCAWKTAWCTGCT
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T C T A G G T A C C G T A C G T A A C T G A C G T C G T A C G T A G T A C A C G T A C T G A G T C A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----RCAWKTAWCTGCT
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T C T A G G T A C C G T A C G T A A C T G A C G T C G T A C G T A G T A C A C G T A C T G A G T C A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

Barhl1/MA0877.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RCAWKTAWCTGCT
NNCAATTANN----
 A C G T C T A G G T A C C G T A C G T A A C T G A C G T C G T A C G T A G T A C A C G T A C T G A G T C A C G T
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:RCAWKTAWCTGCT
-----YAACBGCC
 C T A G G T A C C G T A C G T A A C T G A C G T C G T A C G T A G T A C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C