Information for 16-CTGAGGTTACCTCTGY (Motif 17)

G T A C C G A T A T C G G T C A C T A G C T A G A C G T G C A T C G T A A G T C A G T C A C G T A G T C C G A T C T A G A G T C
Reverse Opposite:
T C A G A G T C C G T A A C T G C G T A C T A G C T A G C G A T C G T A C G T A A G T C G A T C C A G T A T G C C G T A A C T G
p-value:1e-10
log p-value:-2.368e+01
Information Content per bp:1.741
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 19.5bp
Average Position of motif in Background64.2 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTGAGGTTACCTCTGY
TGACCTAAAGTAACCTCTG-
 A C G T A C G T A C G T A C G T G T A C C G A T A T C G G T C A C T A G C T A G A C G T G C A T C G T A A G T C A G T C A C G T A G T C C G A T C T A G A G T C
A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTGAGGTTACCTCTGY--
--NNNGTGACCTTTGNNN
 G T A C C G A T A T C G G T C A C T A G C T A G A C G T G C A T C G T A A G T C A G T C A C G T A G T C C G A T C T A G A G T C A C G T A C G T
A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CTGAGGTTACCTCTGY
------TGACCYCT--
 G T A C C G A T A T C G G T C A C T A G C T A G A C G T G C A T C G T A A G T C A G T C A C G T A G T C C G A T C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTGAGGTTACCTCTGY
-----CTGACCTTTG-
 G T A C C G A T A T C G G T C A C T A G C T A G A C G T G C A T C G T A A G T C A G T C A C G T A G T C C G A T C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTGAGGTTACCTCTGY----
------TGACCTTTGCCCTA
 G T A C C G A T A T C G G T C A C T A G C T A G A C G T G C A T C G T A A G T C A G T C A C G T A G T C C G A T C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTGAGGTTACCTCTGY
--CNNTTGACCTTTG-
 G T A C C G A T A T C G G T C A C T A G C T A G A C G T G C A T C G T A A G T C A G T C A C G T A G T C C G A T C T A G A G T C
A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTGAGGTTACCTCTGY
-----GTGACCTT---
 G T A C C G A T A T C G G T C A C T A G C T A G A C G T G C A T C G T A A G T C A G T C A C G T A G T C C G A T C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTGAGGTTACCTCTGY-----
------TGACCTTTGCCCTAN
 G T A C C G A T A T C G G T C A C T A G C T A G A C G T G C A T C G T A A G T C A G T C A C G T A G T C C G A T C T A G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTGAGGTTACCTCTGY-
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T G T A C C G A T A T C G G T C A C T A G C T A G A C G T G C A T C G T A A G T C A G T C A C G T A G T C C G A T C T A G A G T C A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTGAGGTTACCTCTGY
------TGACCTYA--
 G T A C C G A T A T C G G T C A C T A G C T A G A C G T G C A T C G T A A G T C A G T C A C G T A G T C C G A T C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T