Information for 15-CTTACCTTACTTTAGA (Motif 16)

G T A C A G C T G C A T G C T A A G T C G T A C C G A T G C A T T C G A A G T C C G A T C G A T A G C T G C T A T C A G C G T A
Reverse Opposite:
A C G T A G T C C A G T T C G A C G T A C G T A T C A G A G C T C G T A C G T A A C T G A C T G C G A T C G T A C T G A C A T G
p-value:1e-11
log p-value:-2.544e+01
Information Content per bp:1.657
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif46.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets59.7 +/- 30.3bp
Average Position of motif in Background54.7 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTTACCTTACTTTAGA
NNACTTACCTN--------
 A C G T A C G T A C G T G T A C A G C T G C A T G C T A A G T C G T A C C G A T G C A T T C G A A G T C C G A T C G A T A G C T G C T A T C A G C G T A
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTTACCTTACTTTAGA
ACTTTCGTTTCT-----
 A C G T G T A C A G C T G C A T G C T A A G T C G T A C C G A T G C A T T C G A A G T C C G A T C G A T A G C T G C T A T C A G C G T A
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CTTACCTTACTTTAGA
NNACTTGCCTT--------
 A C G T A C G T A C G T G T A C A G C T G C A T G C T A A G T C G T A C C G A T G C A T T C G A A G T C C G A T C G A T A G C T G C T A T C A G C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTTACCTTACTTTAGA
TTGACCTANTTATN--
 G T A C A G C T G C A T G C T A A G T C G T A C C G A T G C A T T C G A A G T C C G A T C G A T A G C T G C T A T C A G C G T A
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CTTACCTTACTTTAGA
ATTTTCCATT-------
 A C G T G T A C A G C T G C A T G C T A A G T C G T A C C G A T G C A T T C G A A G T C C G A T C G A T A G C T G C T A T C A G C G T A
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:6
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----CTTACCTTACTTTAGA
CCTTCCTTCCTTCCTTCC--
 A C G T A C G T A C G T A C G T G T A C A G C T G C A T G C T A A G T C G T A C C G A T G C A T T C G A A G T C C G A T C G A T A G C T G C T A T C A G C G T A
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:CTTACCTTACTTTAGA---
-------DGWTTTATGRCN
 G T A C A G C T G C A T G C T A A G T C G T A C C G A T G C A T T C G A A G T C C G A T C G A T A G C T G C T A T C A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

NFIL3/MA0025.1/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--CTTACCTTACTTTAGA
ANGTTACATAA-------
 A C G T A C G T G T A C A G C T G C A T G C T A A G T C G T A C C G A T G C A T T C G A A G T C C G A T C G A T A G C T G C T A T C A G C G T A
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--CTTACCTTACTTTAGA
CAGTTTCGNTTCTN----
 A C G T A C G T G T A C A G C T G C A T G C T A A G T C G T A C C G A T G C A T T C G A A G T C C G A T C G A T A G C T G C T A T C A G C G T A
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C A C G T A C G T A C G T A C G T

TEF/MA0843.1/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-CTTACCTTACTTTAGA
TATTACGTAACA-----
 A C G T G T A C A G C T G C A T G C T A A G T C G T A C C G A T G C A T T C G A A G T C C G A T C G A T A G C T G C T A T C A G C G T A
A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T