Information for 11-GCAGTAAGSTGTGAGG (Motif 11)

A C T G G T A C C G T A A C T G C G A T G T C A C G T A C T A G A T G C C G A T A T C G A C G T A C T G C G T A C T A G A C T G
Reverse Opposite:
G T A C A G T C A C G T A G T C C G T A A T G C C G T A A T C G A G T C A C G T A C G T C G T A A G T C C G A T C A T G G T A C
p-value:1e-16
log p-value:-3.814e+01
Information Content per bp:1.792
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.4 +/- 28.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX15/MA0803.1/Jaspar

Match Rank:1
Score:0.67
Offset:6
Orientation:forward strand
Alignment:GCAGTAAGSTGTGAGG
------AGGTGTGA--
 A C T G G T A C C G T A A C T G C G A T G T C A C G T A C T A G A T G C C G A T A T C G A C G T A C T G C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:2
Score:0.67
Offset:6
Orientation:forward strand
Alignment:GCAGTAAGSTGTGAGG
------AGGTGTGA--
 A C T G G T A C C G T A A C T G C G A T G T C A C G T A C T A G A T G C C G A T A T C G A C G T A C T G C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GCAGTAAGSTGTGAGG
-----AAGGTGTGAA-
 A C T G G T A C C G T A A C T G C G A T G T C A C G T A C T A G A T G C C G A T A T C G A C G T A C T G C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GCAGTAAGSTGTGAGG
-----TAGGTGTGAAG
 A C T G G T A C C G T A A C T G C G A T G T C A C G T A C T A G A T G C C G A T A T C G A C G T A C T G C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GCAGTAAGSTGTGAGG
------AGGTGTGA--
 A C T G G T A C C G T A A C T G C G A T G T C A C G T A C T A G A T G C C G A T A T C G A C G T A C T G C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GCAGTAAGSTGTGAGG--
-----AAGGTGTGAAAAT
 A C T G G T A C C G T A A C T G C G A T G T C A C G T A C T A G A T G C C G A T A T C G A C G T A C T G C G T A C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GCAGTAAGSTGTGAGG
------AGGTGTGA--
 A C T G G T A C C G T A A C T G C G A T G T C A C G T A C T A G A T G C C G A T A T C G A C G T A C T G C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCAGTAAGSTGTGAGG
TGCAGTCATGCGTGACG
 A C G T A C T G G T A C C G T A A C T G C G A T G T C A C G T A C T A G A T G C C G A T A T C G A C G T A C T G C G T A C T A G A C T G
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GCAGTAAGSTGTGAGG
-----AAGGTGTKAA-
 A C T G G T A C C G T A A C T G C G A T G T C A C G T A C T A G A T G C C G A T A T C G A C G T A C T G C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GCAGTAAGSTGTGAGG
------AGGTGTGAAA
 A C T G G T A C C G T A A C T G C G A T G T C A C G T A C T A G A T G C C G A T A T C G A C G T A C T G C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A