Information for 1-AGAGAAYTCAYACTGG (Motif 1)

C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G C T C T G A A G T C C G A T A C T G T C A G
Reverse Opposite:
A G T C A G T C G C T A A C T G G A C T C T G A A C G T A C T G C T G A C T A G A C G T A G C T A G T C A C G T A G T C G C A T
p-value:1e-200
log p-value:-4.607e+02
Information Content per bp:1.849
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif11.38%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.5 +/- 25.6bp
Average Position of motif in Background43.2 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGAGAAYTCAYACTGG
AAGGCGAAATCATCGCA-
 A C G T A C G T C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G C T C T G A A G T C C G A T A C T G T C A G
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGAGAAYTCAYACTGG
--AAAAGTCAA-----
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G C T C T G A A G T C C G A T A C T G T C A G
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----AGAGAAYTCAYACTGG
TTGACCGAGAATTCC------
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G C T C T G A A G T C C G A T A C T G T C A G
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:4
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGAGAAYTCAYACTGG
GGACTGAATTCATGCC--
 A C G T A C G T C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G C T C T G A A G T C C G A T A C T G T C A G
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGAGAAYTCAYACTGG
-TCCAATCCACA----
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G C T C T G A A G T C C G A T A C T G T C A G
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AGAGAAYTCAYACTGG
GACAGAGATATCAGTGT--
 A C G T A C G T A C G T C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G C T C T G A A G T C C G A T A C T G T C A G
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:AGAGAAYTCAYACTGG---
----BAGTCATANTGAAAG
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G C T C T G A A G T C C G A T A C T G T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

PB0177.1_Sox7_2/Jaspar

Match Rank:8
Score:0.49
Offset:-9
Orientation:reverse strand
Alignment:---------AGAGAAYTCAYACTGG
NNCNNNCNCANACAATTAGNAC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G C T C T G A A G T C C G A T A C T G T C A G
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:AGAGAAYTCAYACTGG
--ATGACTCAT-----
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G C T C T G A A G T C C G A T A C T G T C A G
A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:AGAGAAYTCAYACTGG
--GGAAGTGAAAST--
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G C T C T G A A G T C C G A T A C T G T C A G
A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T