Information for 4-GAGAAACCCTATAAAT (Motif 4)

T A C G C G T A C T A G C G T A C T G A C T G A A T G C A G T C G A T C A G C T C G T A A G C T C T G A C G T A C T G A A C G T
Reverse Opposite:
C G T A A G C T C G A T A G C T C T G A A C G T C T G A C T A G A C T G A T C G A G C T A G C T A C G T G A T C C G A T A G T C
p-value:1e-441
log p-value:-1.017e+03
Information Content per bp:1.828
Number of Target Sequences with motif193.0
Percentage of Target Sequences with motif46.06%
Number of Background Sequences with motif22.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets58.2 +/- 33.9bp
Average Position of motif in Background27.1 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GAGAAACCCTATAAAT
------CCYMATAAAA
 T A C G C G T A C T A G C G T A C T G A C T G A A T G C A G T C G A T C A G C T C G T A A G C T C T G A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

Six3/MA0631.1/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GAGAAACCCTATAAAT
ANANGTGATACCCTATN---
 A C G T A C G T A C G T A C G T T A C G C G T A C T A G C G T A C T G A C T G A A T G C A G T C G A T C A G C T C G T A A G C T C T G A C G T A C T G A A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T A C G T A C G T

PH0163.1_Six3/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GAGAAACCCTATAAAT
ANANGTGATACCCTATN---
 A C G T A C G T A C G T A C G T T A C G C G T A C T A G C G T A C T G A C T G A A T G C A G T C G A T C A G C T C G T A A G C T C T G A C G T A C T G A A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:4
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GAGAAACCCTATAAAT
ANANNTGATACCCTATN---
 A C G T A C G T A C G T A C G T T A C G C G T A C T A G C G T A C T G A C T G A A T G C A G T C G A T C A G C T C G T A A G C T C T G A C G T A C T G A A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAGAAACCCTATAAAT
ACTGAAACCA-------
 A C G T T A C G C G T A C T A G C G T A C T G A C T G A A T G C A G T C G A T C A G C T C G T A A G C T C T G A C G T A C T G A A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GAGAAACCCTATAAAT---
-------TCTAAAAATAGA
 T A C G C G T A C T A G C G T A C T G A C T G A A T G C A G T C G A T C A G C T C G T A A G C T C T G A C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GAGAAACCCTATAAAT---
-------ACTATAAATAGA
 T A C G C G T A C T A G C G T A C T G A C T G A A T G C A G T C G A T C A G C T C G T A A G C T C T G A C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAGAAACCCTATAAAT
GCAAAACATTACTA--
 T A C G C G T A C T A G C G T A C T G A C T G A A T G C A G T C G A T C A G C T C G T A A G C T C T G A C G T A C T G A A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GAGAAACCCTATAAAT
ANANGTGATACCCCATT---
 A C G T A C G T A C G T A C G T T A C G C G T A C T A G C G T A C T G A C T G A A T G C A G T C G A T C A G C T C G T A A G C T C T G A C G T A C T G A A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GAGAAACCCTATAAAT
--GWAAYHTGAKMC--
 T A C G C G T A C T A G C G T A C T G A C T G A A T G C A G T C G A T C A G C T C G T A A G C T C T G A C G T A C T G A A C G T
A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T