Information for 3-DGATKAAAGATTAMAG (Motif 3)

C A T G A C T G C T G A A C G T A C T G C G T A C T G A C G T A A C T G C T G A A C G T G C A T C G T A T G A C C T G A A C T G
Reverse Opposite:
T G A C G A C T A C T G C G A T C G T A C G T A A G C T G T A C A C G T A G C T A C G T G T A C G T C A G A C T G T A C G T A C
p-value:1e-19
log p-value:-4.459e+01
Information Content per bp:1.694
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.1 +/- 27.7bp
Average Position of motif in Background50.7 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:DGATKAAAGATTAMAG
-ANGNAAAGGTCA---
 C A T G A C T G C T G A A C G T A C T G C G T A C T G A C G T A A C T G C T G A A C G T G C A T C G T A T G A C C T G A A C T G
A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:DGATKAAAGATTAMAG
-GGTTAAACATTAA--
 C A T G A C T G C T G A A C G T A C T G C G T A C T G A C G T A A C T G C T G A A C G T G C A T C G T A T G A C C T G A A C T G
A C G T C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-DGATKAAAGATTAMAG
GGGGTCAAAGGTCA---
 A C G T C A T G A C T G C T G A A C G T A C T G C G T A C T G A C G T A A C T G C T G A A C G T G C A T C G T A T G A C C T G A A C T G
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-DGATKAAAGATTAMAG
GAGGTCAAAGGTCA---
 A C G T C A T G A C T G C T G A A C G T A C T G C G T A C T G A C G T A A C T G C T G A A C G T G C A T C G T A T G A C C T G A A C T G
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-DGATKAAAGATTAMAG
GGGGTCAAAGGTCA---
 A C G T C A T G A C T G C T G A A C G T A C T G C G T A C T G A C G T A A C T G C T G A A C G T G C A T C G T A T G A C C T G A A C T G
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-DGATKAAAGATTAMAG
GGGGTCAAAGGTCA---
 A C G T C A T G A C T G C T G A A C G T A C T G C G T A C T G A C G T A A C T G C T G A A C G T G C A T C G T A T G A C C T G A A C T G
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.65
Offset:5
Orientation:forward strand
Alignment:DGATKAAAGATTAMAG-
-----AAAGATCAAAGG
 C A T G A C T G C T G A A C G T A C T G C G T A C T G A C G T A A C T G C T G A A C G T G C A T C G T A T G A C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:DGATKAAAGATTAMAG-
-TCTCAAAGGTCACGAG
 C A T G A C T G C T G A A C G T A C T G C G T A C T G A C G T A A C T G C T G A A C G T G C A T C G T A T G A C C T G A A C T G A C G T
A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:DGATKAAAGATTAMAG-
-TCTCAAAGGTCACCTG
 C A T G A C T G C T G A A C G T A C T G C G T A C T G A C G T A A C T G C T G A A C G T G C A T C G T A T G A C C T G A A C T G A C G T
A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--DGATKAAAGATTAMAG
GTAGGGCAAAGGTCA---
 A C G T A C G T C A T G A C T G C T G A A C G T A C T G C G T A C T G A C G T A A C T G C T G A A C G T G C A T C G T A T G A C C T G A A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T