Information for 11-AAAGCAAGCTGTA (Motif 11)

C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T
p-value:1e-6
log p-value:-1.444e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.0 +/- 29.1bp
Average Position of motif in Background62.4 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAAGCAAGCTGTA------
--AGGACGCTGTAAAGGGA
 C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAAGCAAGCTGTA-
----CCAGCTGTTN
 C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAAGCAAGCTGTA------
--AAGACGCTGTAAAGCGA
 C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAAGCAAGCTGTA------
--AAGACGCTGTAAAGCGA
 C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAAGCAAGCTGTA
----CAAGCTT--
 C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T C G T A
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AAAGCAAGCTGTA
--NAHCAGCTGD-
 C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T C G T A
A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAAGCAAGCTGTA
AAGGCAAGTGT--
 C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AAAGCAAGCTGTA
-----CAGCTGTT
 C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AAAGCAAGCTGTA
-------GCTGTG
 C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AAAGCAAGCTGTA
---RCCATMTGTT
 C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C T G A C G T C G T A
A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T