Information for 3-CMCCCCSAGGGCSCGA (Motif 5)

A G T C T G A C A G T C G T A C G A T C A T G C A T C G C G T A C A T G C T A G A C T G A G T C A T G C A G T C A C T G T C G A
Reverse Opposite:
A G C T G T A C A C T G T A C G T C A G T G A C A G T C G T A C A C G T A T G C A T C G C A T G A C T G C T A G A C T G T C A G
p-value:1e-11
log p-value:-2.719e+01
Information Content per bp:1.711
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 22.3bp
Average Position of motif in Background64.0 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CMCCCCSAGGGCSCGA-----
-GCCASCAGGGGGCGCYVNNG
 A G T C T G A C A G T C G T A C G A T C A T G C A T C G C G T A C A T G C T A G A C T G A G T C A T G C A G T C A C T G T C G A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PLAG1/MA0163.1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CMCCCCSAGGGCSCGA
-CCCCCTTGGGCCCC-
 A G T C T G A C A G T C G T A C G A T C A T G C A T C G C G T A C A T G C T A G A C T G A G T C A T G C A G T C A C T G T C G A
A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CMCCCCSAGGGCSCGA
TGCCCNNAGGGCA---
 A G T C T G A C A G T C G T A C G A T C A T G C A T C G C G T A C A T G C T A G A C T G A G T C A T G C A G T C A C T G T C G A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CMCCCCSAGGGCSCGA
TGCCCTNAGGGCA---
 A G T C T G A C A G T C G T A C G A T C A T G C A T C G C G T A C A T G C T A G A C T G A G T C A T G C A G T C A C T G T C G A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CMCCCCSAGGGCSCGA--
TGGCCACCAGGGGGCGCTA
 A C G T A G T C T G A C A G T C G T A C G A T C A T G C A T C G C G T A C A T G C T A G A C T G A G T C A T G C A G T C A C T G T C G A A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CMCCCCSAGGGCSCGA
TGCCCTGAGGGCA---
 A G T C T G A C A G T C G T A C G A T C A T G C A T C G C G T A C A T G C T A G A C T G A G T C A T G C A G T C A C T G T C G A
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CMCCCCSAGGGCSCGA
CCCCCCCGGGGGNN---
 A C G T A G T C T G A C A G T C G T A C G A T C A T G C A T C G C G T A C A T G C T A G A C T G A G T C A T G C A G T C A C T G T C G A
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CMCCCCSAGGGCSCGA
CCCCCCCCAC-------
 A C G T A G T C T G A C A G T C G T A C G A T C A T G C A T C G C G T A C A T G C T A G A C T G A G T C A T G C A G T C A C T G T C G A
T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CMCCCCSAGGGCSCGA
GCACCCCTGGGTGCC--
 A C G T A G T C T G A C A G T C G T A C G A T C A T G C A T C G C G T A C A T G C T A G A C T G A G T C A T G C A G T C A C T G T C G A
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CMCCCCSAGGGCSCGA
ACCCCCCCGGGGGGN---
 A C G T A C G T A G T C T G A C A G T C G T A C G A T C A T G C A T C G C G T A C A T G C T A G A C T G A G T C A T G C A G T C A C T G T C G A
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T