Information for 8-CAGACCGACA (Motif 17)

A T G C C G T A A C T G C T G A A T G C T A G C T C A G C G T A A G T C C T G A
Reverse Opposite:
A G C T A C T G A C G T A G T C A T C G A T C G A G C T A G T C A C G T A T C G
p-value:1e-9
log p-value:-2.141e+01
Information Content per bp:1.862
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif41.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets46.4 +/- 23.1bp
Average Position of motif in Background49.7 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCGACA
CCAGACAG---
 A C G T A T G C C G T A A C T G C T G A A T G C T A G C T C A G C G T A A G T C C T G A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCGACA
CCAGACRSVB-
 A C G T A T G C C G T A A C T G C T G A A T G C T A G C T C A G C G T A A G T C C T G A
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAGACCGACA
ATGCCAGACN----
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G C T G A A T G C T A G C T C A G C G T A A G T C C T G A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGACCGACA--
BTGABTGACAGS
 A T G C C G T A A C T G C T G A A T G C T A G C T C A G C G T A A G T C C T G A A C G T A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGACCGACA--
NTGATTGACAGN
 A T G C C G T A A C T G C T G A A T G C T A G C T C A G C G T A A G T C C T G A A C G T A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAGACCGACA
AGCAACAGCCGCACC
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G C T G A A T G C T A G C T C A G C G T A A G T C C T G A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCGACA
BCAGACWA---
 A C G T A T G C C G T A A C T G C T G A A T G C T A G C T C A G C G T A A G T C C T G A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGACCGACA-------
CTGATCGAAACCAAAGT
 A T G C C G T A A C T G C T G A A T G C T A G C T C A G C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CAGACCGACA-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G C T G A A T G C T A G C T C A G C G T A A G T C C T G A A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAGACCGACA-----
GNNACCGAGAATNNN
 A T G C C G T A A C T G C T G A A T G C T A G C T C A G C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T