Information for 10-CCWGTGAMWCCAM (Motif 20)

A G T C A G T C C G T A A T C G A C G T A C T G C G T A G T A C C G A T A G T C A G T C C G T A G T A C
Reverse Opposite:
A C T G C G A T A C T G A C T G C G T A A C T G C G A T A G T C C G T A A T G C C G A T A C T G A C T G
p-value:1e-8
log p-value:-2.039e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.7 +/- 22.9bp
Average Position of motif in Background61.1 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCWGTGAMWCCAM
-CNGTCACGCCAC
 A G T C A G T C C G T A A T C G A C G T A C T G C G T A G T A C C G A T A G T C A G T C C G T A G T A C
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCWGTGAMWCCAM
--ACTGAAACCA-
 A G T C A G T C C G T A A T C G A C G T A C T G C G T A G T A C C G A T A G T C A G T C C G T A G T A C
A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CCWGTGAMWCCAM
NNNNTGCCAGTGATTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A T C G A C G T A C T G C G T A G T A C C G A T A G T C A G T C C G T A G T A C
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCWGTGAMWCCAM
RTCATGTGAC-----
 A C G T A C G T A G T C A G T C C G T A A T C G A C G T A C T G C G T A G T A C C G A T A G T C A G T C C G T A G T A C
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCWGTGAMWCCAM---
ATAAATGACACCTATCA
 A C G T A G T C A G T C C G T A A T C G A C G T A C T G C G T A G T A C C G A T A G T C A G T C C G T A G T A C A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCWGTGAMWCCAM---
TGTCGTGACCCCTTAAT
 A C G T A G T C A G T C C G T A A T C G A C G T A C T G C G T A G T A C C G A T A G T C A G T C C G T A G T A C A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CCWGTGAMWCCAM
-------ATCCAC
 A G T C A G T C C G T A A T C G A C G T A C T G C G T A G T A C C G A T A G T C A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCWGTGAMWCCAM
-NCGTGACN----
 A G T C A G T C C G T A A T C G A C G T A C T G C G T A G T A C C G A T A G T C A G T C C G T A G T A C
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCWGTGAMWCCAM
---ATCACCCCAT
 A G T C A G T C C G T A A T C G A C G T A C T G C G T A G T A C C G A T A G T C A G T C C G T A G T A C
A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCWGTGAMWCCAM
AAAGACCTGTCAATCC--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A T C G A C G T A C T G C G T A G T A C C G A T A G T C A G T C C G T A G T A C
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C A C G T A C G T