p-value: | 1e-8 |
log p-value: | -2.046e+01 |
Information Content per bp: | 1.745 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.85% |
Number of Background Sequences with motif | 11.5 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 37.0 +/- 16.9bp |
Average Position of motif in Background | 39.6 +/- 16.8bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | STTTGAGTGTCAGGGA --NTGATTGACAGN-- |
|
|
|
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | STTTGAGTGTCAGGGA -CTYRAGTGSY----- |
|
|
|
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | STTTGAGTGTCAGGGA --BTGABTGACAGS-- |
|
|
|
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | STTTGAGTGTCAGGGA -BTBRAGTGSN----- |
|
|
|
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | STTTGAGTGTCAGGGA ---TGAGTGACAGSC- |
|
|
|
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | STTTGAGTGTCAGGGA --TTGAGTGSTT---- |
|
|
|
NKX2-8/MA0673.1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | STTTGAGTGTCAGGGA -NTCAAGTGG------ |
|
|
|
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | STTTGAGTGTCAGGGA --TTRAGTGSYK---- |
|
|
|
Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | STTTGAGTGTCAGGGA -CTTGAGTGGCT---- |
|
|
|
NKX3-2/MA0122.2/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | STTTGAGTGTCAGGGA --TTAAGTGGN----- |
|
|
|