Information for 10-GTCGATACCD (Motif 17)

A C T G A C G T G T A C A T C G C T G A C G A T C G T A A G T C A T G C C A G T
Reverse Opposite:
G C T A A T C G A C T G A C G T C G T A A G C T A T G C A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.040e+01
Information Content per bp:1.799
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif86.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets38.8 +/- 21.6bp
Average Position of motif in Background46.7 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTCGATACCD----
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C T G A C G T G T A C A T C G C T G A C G A T C G T A A G T C A T G C C A G T A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCGATACCD--
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C T G A C G T G T A C A T C G C T G A C G A T C G T A A G T C A T G C C A G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTCGATACCD---
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T A C T G A C G T G T A C A T C G C T G A C G A T C G T A A G T C A T G C C A G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTCGATACCD-
ATAAACCGAAACCAA
 A C G T A C G T A C G T A C G T A C T G A C G T G T A C A T C G C T G A C G A T C G T A A G T C A T G C C A G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTCGATACCD----
NNGGCGACACCTCNNN
 A C G T A C G T A C T G A C G T G T A C A T C G C T G A C G A T C G T A A G T C A T G C C A G T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0159.1_Rfx4_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTCGATACCD-
TACCCTAGTTACCGA
 A C G T A C G T A C G T A C G T A C T G A C G T G T A C A T C G C T G A C G A T C G T A A G T C A T G C C A G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTCGATACCD-
NNACTTACCTN
 A C T G A C G T G T A C A T C G C T G A C G A T C G T A A G T C A T G C C A G T A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTCGATACCD----
AATNTTGATACCCTATN
 A C G T A C G T A C G T A C T G A C G T G T A C A T C G C T G A C G A T C G T A A G T C A T G C C A G T A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------GTCGATACCD-----
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T A C A T C G C T G A C G A T C G T A A G T C A T G C C A G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTCGATACCD
CGTCTAGACA-
 A C G T A C T G A C G T G T A C A T C G C T G A C G A T C G T A A G T C A T G C C A G T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T