Information for 4-CAAACATTGC (Motif 12)

A G T C C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A G T C A A C G T A C T G C G A T A C G T A C G T A C T G
p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.921
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.9 +/- 20.8bp
Average Position of motif in Background41.9 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CAAACATTGC----
GAAAAAATTGCAAGG
 A C G T A G T C C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAAACATTGC
AAATCACTGC
 A G T C C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C T G A G T C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAAACATTGC
CCAATCAA---
 A C G T A G T C C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C T G A G T C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAACATTGC----
CTAATATTGCTAAA
 A G T C C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAACATTGC----
CTAATATTGCTAAA
 A G T C C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAAACATTGC
VRAACAATGG
 A G T C C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C T G A G T C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAAACATTGC
AAACAAACATTC-
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C T G A G T C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CAAACATTGC-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C T G A G T C A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAAACATTGC--
GCAAAACATTACTA
 A C G T A C G T A G T C C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C T G A G T C A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAACATTGC-
AAATCACAGCA
 A G T C C G T A C G T A C G T A G T A C C G T A A C G T A C G T A C T G A G T C A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A