Information for 15-CAGGTTACACACA (Motif 24)

A G T C C T G A A T C G C T A G A C G T G A C T G T C A A G T C G T C A A G T C G C T A A G T C C G T A
Reverse Opposite:
A C G T A C T G C G A T A C T G A C G T C T A G C A G T C T G A G T C A A G T C T A G C A G C T C T A G
p-value:1e-8
log p-value:-1.940e+01
Information Content per bp:1.784
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif52.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets42.1 +/- 23.8bp
Average Position of motif in Background59.3 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGGTTACACACA-
-AGGTGNCAGACAG
 A G T C C T G A A T C G C T A G A C G T G A C T G T C A A G T C G T C A A G T C G C T A A G T C C G T A A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAGGTTACACACA-
--GGCCACACCCAN
 A G T C C T G A A T C G C T A G A C G T G A C T G T C A A G T C G T C A A G T C G C T A A G T C C G T A A C G T
A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

Klf1/MA0493.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGGTTACACACA
--GGCCACACCCA
 A G T C C T G A A T C G C T A G A C G T G A C T G T C A A G T C G T C A A G T C G C T A A G T C C G T A
A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAGGTTACACACA
---GCCACACCCA
 A G T C C T G A A T C G C T A G A C G T G A C T G T C A A G T C G T C A A G T C G C T A A G T C C G T A
A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGGTTACACACA-----
--AGCGGCACACACGCAA
 A G T C C T G A A T C G C T A G A C G T G A C T G T C A A G T C G T C A A G T C G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CAGGTTACACACA
-------CACGCA
 A G T C C T G A A T C G C T A G A C G T G A C T G T C A A G T C G T C A A G T C G C T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAGGTTACACACA
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A G T C C T G A A T C G C T A G A C G T G A C T G T C A A G T C G T C A A G T C G C T A A G T C C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGGTTACACACA
-AGGTGHCAGACA
 A G T C C T G A A T C G C T A G A C G T G A C T G T C A A G T C G T C A A G T C G C T A A G T C C G T A
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CAGGTTACACACA-
----TBGCACGCAA
 A G T C C T G A A T C G C T A G A C G T G A C T G T C A A G T C G T C A A G T C G C T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CAGGTTACACACA
GKVTCADRTTWC-----
 A C G T A C G T A C G T A C G T A G T C C T G A A T C G C T A G A C G T G A C T G T C A A G T C G T C A A G T C G C T A A G T C C G T A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T