Information for 10-TTGTCCACATGCATGT (Motif 20)

A C G T A C G T C T A G A C G T A G T C A G T C C G T A A G T C C G T A A C G T C T A G A G T C C G T A A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G A T A C T G A G T C G T C A A C G T A C T G C G A T A C T G A C T G G T C A A G T C C G T A C G T A
p-value:1e-8
log p-value:-2.044e+01
Information Content per bp:1.927
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.5 +/- 20.3bp
Average Position of motif in Background81.4 +/- 0.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTGTCCACATGCATGT---
--GACCACATTCATACAAT
 A C G T A C G T C T A G A C G T A G T C A G T C C G T A A G T C C G T A A C G T C T A G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCACATGCATGT
CAGATGTGCACATACGT--
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A G T C A G T C C G T A A G T C C G T A A C G T C T A G A G T C C G T A A C G T A C T G A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTGTCCACATGCATGT
-YATGCATATRCATRT
 A C G T A C G T C T A G A C G T A G T C A G T C C G T A A G T C C G T A A C G T C T A G A G T C C G T A A C G T A C T G A C G T
A C G T G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TTGTCCACATGCATGT----
------ACATTCATGACACG
 A C G T A C G T C T A G A C G T A G T C A G T C C G T A A G T C C G T A A C G T C T A G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCACATGCATGT
TACATGTGCACATAAAA--
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A G T C A G T C C G T A A G T C C G T A A C G T C T A G A G T C C G T A A C G T A C T G A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TTGTCCACATGCATGT
--AAGCACATGG----
 A C G T A C G T C T A G A C G T A G T C A G T C C G T A A G T C C G T A A C G T C T A G A G T C C G T A A C G T A C T G A C G T
A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TTGTCCACATGCATGT
---GCCACGTG-----
 A C G T A C G T C T A G A C G T A G T C A G T C C G T A A G T C C G T A A C G T C T A G A G T C C G T A A C G T A C T G A C G T
A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TTGTCCACATGCATGT------
-----TAAATACATGTAAAATT
 A C G T A C G T C T A G A C G T A G T C A G T C C G T A A G T C C G T A A C G T C T A G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TTGTCCACATGCATGT------
-----AAAATACATGTAAAAAT
 A C G T A C G T C T A G A C G T A G T C A G T C C G T A A G T C C G T A A C G T C T A G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TTGTCCACATGCATGT
--NNCCACGTGG----
 A C G T A C G T C T A G A C G T A G T C A G T C C G T A A G T C C G T A A C G T C T A G A G T C C G T A A C G T A C T G A C G T
A C G T A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T A C G T