Information for 7-SYRWCATGCCAVCRCA (Motif 11)

T A G C G A C T T C G A C G T A A T G C G T C A C G A T A C T G A G T C G T A C C G T A T G A C G A T C C T A G A G T C G C T A
Reverse Opposite:
C G A T C T A G A G T C C T A G A C T G A C G T A C T G T C A G T G A C C G T A C A G T T A C G G C A T A G C T C T G A A T C G
p-value:1e-11
log p-value:-2.586e+01
Information Content per bp:1.624
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.1 +/- 22.6bp
Average Position of motif in Background39.2 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:SYRWCATGCCAVCRCA
----CGTGCCAAG---
 T A G C G A C T T C G A C G T A A T G C G T C A C G A T A C T G A G T C G T A C C G T A T G A C G A T C C T A G A G T C G C T A
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:SYRWCATGCCAVCRCA
------TGCCAA----
 T A G C G A C T T C G A C G T A A T G C G T C A C G A T A C T G A G T C G T A C C G T A T G A C G A T C C T A G A G T C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.68
Offset:5
Orientation:forward strand
Alignment:SYRWCATGCCAVCRCA
-----ATGCCAACC--
 T A G C G A C T T C G A C G T A A T G C G T C A C G A T A C T G A G T C G T A C C G T A T G A C G A T C C T A G A G T C G C T A
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:SYRWCATGCCAVCRCA--
--ACTATGCCAACCTACC
 T A G C G A C T T C G A C G T A A T G C G T C A C G A T A C T G A G T C G T A C C G T A T G A C G A T C C T A G A G T C G C T A A C G T A C G T
A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:SYRWCATGCCAVCRCA
----GGTGCCAAGT--
 T A G C G A C T T C G A C G T A A T G C G T C A C G A T A C T G A G T C G T A C C G T A T G A C G A T C C T A G A G T C G C T A
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:SYRWCATGCCAVCRCA
----CTTGGCAA----
 T A G C G A C T T C G A C G T A A T G C G T C A C G A T A C T G A G T C G T A C C G T A T G A C G A T C C T A G A G T C G C T A
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:SYRWCATGCCAVCRCA-
---ACATGCCCGGGCAT
 T A G C G A C T T C G A C G T A A T G C G T C A C G A T A C T G A G T C G T A C C G T A T G A C G A T C C T A G A G T C G C T A A C G T
A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:SYRWCATGCCAVCRCA
----SCTGTCARCACC
 T A G C G A C T T C G A C G T A A T G C G T C A C G A T A C T G A G T C G T A C C G T A T G A C G A T C C T A G A G T C G C T A
A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:SYRWCATGCCAVCRCA------
--AACATGCCCAGACATGCCCN
 T A G C G A C T T C G A C G T A A T G C G T C A C G A T A C T G A G T C G T A C C G T A T G A C G A T C C T A G A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:SYRWCATGCCAVCRCA------
--AACATGCCCAGACATGCCCN
 T A G C G A C T T C G A C G T A A T G C G T C A C G A T A C T G A G T C G T A C C G T A T G A C G A T C C T A G A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T