Information for 6-RAGGYAACCYYCTGCM (Motif 10)

T C A G C G T A A T C G C T A G A G C T C T G A G T C A A G T C A T G C G A C T A G C T G T A C A C G T A C T G A G T C G T C A
Reverse Opposite:
A C G T C T A G A G T C C G T A A C T G C T G A C T G A A T C G A C T G A C G T A G C T C T G A A G T C A T G C A C G T A G T C
p-value:1e-11
log p-value:-2.637e+01
Information Content per bp:1.758
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 21.5bp
Average Position of motif in Background56.1 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--RAGGYAACCYYCTGCM
NNNNGGTACCCCCCANN-
 A C G T A C G T T C A G C G T A A T C G C T A G A G C T C T G A G T C A A G T C A T G C G A C T A G C T G T A C A C G T A C T G A G T C G T C A
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--RAGGYAACCYYCTGCM--
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T T C A G C G T A A T C G C T A G A G C T C T G A G T C A A G T C A T G C G A C T A G C T G T A C A C G T A C T G A G T C G T C A A C G T A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:RAGGYAACCYYCTGCM
------ACCATCTGTT
 T C A G C G T A A T C G C T A G A G C T C T G A G T C A A G T C A T G C G A C T A G C T G T A C A C G T A C T G A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:RAGGYAACCYYCTGCM
------GCCATCTGTT
 T C A G C G T A A T C G C T A G A G C T C T G A G T C A A G T C A T G C G A C T A G C T G T A C A C G T A C T G A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.51
Offset:6
Orientation:forward strand
Alignment:RAGGYAACCYYCTGCM
------RCCATMTGTT
 T C A G C G T A A T C G C T A G A G C T C T G A G T C A A G T C A T G C G A C T A G C T G T A C A C G T A C T G A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:RAGGYAACCYYCTGCM---
--CCNNACCATCTGGCCTN
 T C A G C G T A A T C G C T A G A G C T C T G A G T C A A G T C A T G C G A C T A G C T G T A C A C G T A C T G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:RAGGYAACCYYCTGCM-
-----SNGCACCTGCHS
 T C A G C G T A A T C G C T A G A G C T C T G A G T C A A G T C A T G C G A C T A G C T G T A C A C G T A C T G A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:RAGGYAACCYYCTGCM
AAGGTCAC--------
 T C A G C G T A A T C G C T A G A G C T C T G A G T C A A G T C A T G C G A C T A G C T G T A C A C G T A C T G A G T C G T C A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:RAGGYAACCYYCTGCM-
--GGCCYCCTGCTGDGH
 T C A G C G T A A T C G C T A G A G C T C T G A G T C A A G T C A T G C G A C T A G C T G T A C A C G T A C T G A G T C G T C A A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:forward strand
Alignment:RAGGYAACCYYCTGCM----
-----GACCCCCCGCTGCGC
 T C A G C G T A A T C G C T A G A G C T C T G A G T C A A G T C A T G C G A C T A G C T G T A C A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C