Information for 7-RACAGKKMYAYGSTCC (Motif 9)

C T A G C G T A A G T C C G T A A C T G C A G T C A G T G T A C A G T C C G T A A G T C A C T G A T G C A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G C G T A A T C G A G T C T C A G C G A T C T A G A C T G G T A C G T C A A G T C A C G T A C T G A C G T A G T C
p-value:1e-10
log p-value:-2.429e+01
Information Content per bp:1.808
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.5 +/- 23.9bp
Average Position of motif in Background52.5 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.56
Offset:11
Orientation:forward strand
Alignment:RACAGKKMYAYGSTCC-
-----------GCTCCG
 C T A G C G T A A G T C C G T A A C T G C A G T C A G T G T A C A G T C C G T A A G T C A C T G A T G C A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:RACAGKKMYAYGSTCC
CACAGN----------
 C T A G C G T A A G T C C G T A A C T G C A G T C A G T G T A C A G T C C G T A A G T C A C T G A T G C A C G T A T G C A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MYBL2/MA0777.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:RACAGKKMYAYGSTCC
GACNGTTTAACGGTT-
 C T A G C G T A A G T C C G T A A C T G C A G T C A G T G T A C A G T C C G T A A G T C A C T G A T G C A C G T A T G C A G T C
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--RACAGKKMYAYGSTCC
TTGACAGC----------
 A C G T A C G T C T A G C G T A A G T C C G T A A C T G C A G T C A G T G T A C A G T C C G T A A G T C A C T G A T G C A C G T A T G C A G T C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:RACAGKKMYAYGSTCC
-VCAGGTRDRY-----
 C T A G C G T A A G T C C G T A A C T G C A G T C A G T G T A C A G T C C G T A A G T C A C T G A T G C A C G T A T G C A G T C
A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--RACAGKKMYAYGSTCC
TTGACAGG----------
 A C G T A C G T C T A G C G T A A G T C C G T A A C T G C A G T C A G T G T A C A G T C C G T A A G T C A C T G A T G C A C G T A T G C A G T C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----RACAGKKMYAYGSTCC
NTATTGACAGGTNNTN-----
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C C G T A A C T G C A G T C A G T G T A C A G T C C G T A A G T C A C T G A T G C A C G T A T G C A G T C
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T A C G T A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----RACAGKKMYAYGSTCC
GGATTGACAGGTCNTT-----
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C C G T A A C T G C A G T C A G T G T A C A G T C C G T A A G T C A C T G A T G C A C G T A T G C A G T C
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----RACAGKKMYAYGSTCC
NNATTGACAGGTGCTT-----
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C C G T A A C T G C A G T C A G T G T A C A G T C C G T A A G T C A C T G A T G C A C G T A T G C A G T C
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--RACAGKKMYAYGSTCC
TTGACAG-----------
 A C G T A C G T C T A G C G T A A G T C C G T A A C T G C A G T C A G T G T A C A G T C C G T A A G T C A C T G A T G C A C G T A T G C A G T C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T