Information for 4-GGCCCWTWMYTYKWCT (Motif 5)

A T C G A C T G A G T C A G T C A G T C C G A T A C G T C G A T G T C A A G T C A G C T A G T C A C G T G C A T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A G T C A C T A G C T G A C T A G C A G T C G T A C G T A C G T A A C T G C T A G A C T G G T A C A T G C
p-value:1e-11
log p-value:-2.645e+01
Information Content per bp:1.818
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.4 +/- 12.7bp
Average Position of motif in Background36.3 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGCCCWTWMYTYKWCT
NNGCACCTTTCTCC----
 A C G T A C G T A T C G A C T G A G T C A G T C A G T C C G A T A C G T C G A T G T C A A G T C A G C T A G T C A C G T G C A T A G T C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCWTWMYTYKWCT
TNNTCCTTTGTTCTNNT
 A C G T A T C G A C T G A G T C A G T C A G T C C G A T A C G T C G A T G T C A A G T C A G C T A G T C A C G T G C A T A G T C A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GGCCCWTWMYTYKWCT
CTAGGCCT-----------
 A C G T A C G T A C G T A T C G A C T G A G T C A G T C A G T C C G A T A C G T C G A T G T C A A G T C A G C T A G T C A C G T G C A T A G T C A C G T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GGCCCWTWMYTYKWCT
AAGACCCYYN--------
 A C G T A C G T A T C G A C T G A G T C A G T C A G T C C G A T A C G T C G A T G T C A A G T C A G C T A G T C A C G T G C A T A G T C A C G T
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GGCCCWTWMYTYKWCT
CTGCCCGCA--------
 A C G T A T C G A C T G A G T C A G T C A G T C C G A T A C G T C G A T G T C A A G T C A G C T A G T C A C G T G C A T A G T C A C G T
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.48
Offset:2
Orientation:forward strand
Alignment:GGCCCWTWMYTYKWCT
--NCCATTGTTC----
 A T C G A C T G A G T C A G T C A G T C C G A T A C G T C G A T G T C A A G T C A G C T A G T C A C G T G C A T A G T C A C G T
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCWTWMYTYKWCT
NNNTCCTTTGTTCTNNN
 A C G T A T C G A C T G A G T C A G T C A G T C C G A T A C G T C G A T G T C A A G T C A G C T A G T C A C G T G C A T A G T C A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.46
Offset:3
Orientation:forward strand
Alignment:GGCCCWTWMYTYKWCT
---CCTTTGTTTT---
 A T C G A C T G A G T C A G T C A G T C C G A T A C G T C G A T G T C A A G T C A G C T A G T C A C G T G C A T A G T C A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.46
Offset:3
Orientation:forward strand
Alignment:GGCCCWTWMYTYKWCT
---CCTTTGTT-----
 A T C G A C T G A G T C A G T C A G T C C G A T A C G T C G A T G T C A A G T C A G C T A G T C A C G T G C A T A G T C A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---GGCCCWTWMYTYKWCT
CNAGGCCT-----------
 A C G T A C G T A C G T A T C G A C T G A G T C A G T C A G T C C G A T A C G T C G A T G T C A A G T C A G C T A G T C A C G T G C A T A G T C A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T