p-value: | 1e-10 |
log p-value: | -2.331e+01 |
Information Content per bp: | 1.842 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.61% |
Number of Background Sequences with motif | 35.2 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 46.9 +/- 29.7bp |
Average Position of motif in Background | 57.0 +/- 21.8bp |
Strand Bias (log2 ratio + to - strand density) | -1.4 |
Multiplicity (# of sites on avg that occur together) | 1.10 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGTGTCAGGGCCA VBTGWCAGCB--- |
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Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGTGTCAGGGCCA NTGATTGACAGN---- |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 3 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTGTCAGGGCCA TGAGTGACAGSC--- |
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PH0141.1_Pknox2/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTGTCAGGGCCA- NNATTGACAGGTGCTT |
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INSM1/MA0155.1/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGTGTCAGGGCCA- --TGTCAGGGGGCG |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGTGTCAGGGCCA -TTGCCAAG---- |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGTGTCAGGGCCA BTGABTGACAGS---- |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGTGTCAGGGCCA TTRAGTGSYK------ |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGTGTCAGGGCCA AGGTGHCAGACA-- |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AGTGTCAGGGCCA CTYRAGTGSY------- |
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