Information for 3-AACTACAHHTCCC (Motif 3)

T C G A C G T A A G T C A G C T T C G A A G T C T C G A G A C T G A C T A G C T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C T G A C T G A C T G A A G C T A C T G A C G T C T G A A C T G A C G T A G C T
p-value:1e-16
log p-value:-3.780e+01
Information Content per bp:1.825
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif120.9
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets50.0 +/- 29.7bp
Average Position of motif in Background43.4 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.92
Offset:1
Orientation:forward strand
Alignment:AACTACAHHTCCC
-ACTACAATTCCC
 T C G A C G T A A G T C A G C T T C G A A G T C T C G A G A C T G A C T A G C T A G T C A G T C A G T C
A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.85
Offset:0
Orientation:forward strand
Alignment:AACTACAHHTCCC-------
RACTACAACTCCCAGVAKGC
 T C G A C G T A A G T C A G C T T C G A A G T C T C G A G A C T G A C T A G C T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.83
Offset:0
Orientation:forward strand
Alignment:AACTACAHHTCCC-------
AACTACAATTCCCAGAATGC
 T C G A C G T A A G T C A G C T T C G A A G T C T C G A G A C T G A C T A G C T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AACTACAHHTCCC
NWAACCACADNN---
 A C G T A C G T T C G A C G T A A G T C A G C T T C G A A G T C T C G A G A C T G A C T A G C T A G T C A G T C A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AACTACAHHTCCC
AAACCACANN----
 A C G T T C G A C G T A A G T C A G C T T C G A A G T C T C G A G A C T G A C T A G C T A G T C A G T C A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AACTACAHHTCCC
NAAACCACAG-----
 A C G T A C G T T C G A C G T A A G T C A G C T T C G A A G T C T C G A G A C T G A C T A G C T A G T C A G T C A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AACTACAHHTCCC-
TNAACGACGTCGNCCA
 A C G T A C G T T C G A C G T A A G T C A G C T T C G A A G T C T C G A G A C T G A C T A G C T A G T C A G T C A G T C A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AACTACAHHTCCC
AAACCACAGC----
 A C G T T C G A C G T A A G T C A G C T T C G A A G T C T C G A G A C T G A C T A G C T A G T C A G T C A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:AACTACAHHTCCC--
---------TCCCCA
 T C G A C G T A A G T C A G C T T C G A A G T C T C G A G A C T G A C T A G C T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

HMBOX1/MA0895.1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AACTACAHHTCCC
GTTAACTAGN------
 A C G T A C G T A C G T T C G A C G T A A G T C A G C T T C G A A G T C T C G A G A C T G A C T A G C T A G T C A G T C A G T C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T