Information for 15-CACGCACACA (Motif 22)

A G T C T C G A A T G C C T A G A T G C G T C A A G T C C T G A G A T C G C T A
Reverse Opposite:
C G A T C T A G A G C T A C T G A C G T A T C G A G T C A T C G A G C T A C T G
p-value:1e-6
log p-value:-1.589e+01
Information Content per bp:1.832
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.72%
Number of Background Sequences with motif498.4
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets56.0 +/- 25.8bp
Average Position of motif in Background48.6 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CACGCACACA-----
CGAAGCACACAAAATA
 A C G T A G T C T C G A A T G C C T A G A T G C G T C A A G T C C T G A G A T C G C T A A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CACGCACACA
CRCCCACGCA
 A G T C T C G A A T G C C T A G A T G C G T C A A G T C C T G A G A T C G C T A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CACGCACACA-----
AGCGGCACACACGCAA
 A C G T A G T C T C G A A T G C C T A G A T G C G T C A A G T C C T G A G A T C G C T A A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CACGCACACA
CACGCA----
 A G T C T C G A A T G C C T A G A T G C G T C A A G T C C T G A G A T C G C T A
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACGCACACA
GCCACRCCCACY
 A C G T A C G T A G T C T C G A A T G C C T A G A T G C G T C A A G T C C T G A G A T C G C T A
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CACGCACACA
YCCGCCCACGCN
 A C G T A C G T A G T C T C G A A T G C C T A G A T G C G T C A A G T C C T G A G A T C G C T A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

SP8/MA0747.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACGCACACA
GCCACGCCCACT
 A C G T A C G T A G T C T C G A A T G C C T A G A T G C G T C A A G T C C T G A G A T C G C T A
T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACGCACACA
TBGCACGCAA---
 A C G T A C G T A C G T A G T C T C G A A T G C C T A G A T G C G T C A A G T C C T G A G A T C G C T A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACGCACACA-
GGCCACGCCCCCTT
 A C G T A C G T A C G T A G T C T C G A A T G C C T A G A T G C G T C A A G T C C T G A G A T C G C T A A C G T
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

SP3/MA0746.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACGCACACA
GCCACGCCCCC-
 A C G T A C G T A G T C T C G A A T G C C T A G A T G C G T C A A G T C C T G A G A T C G C T A
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C A C G T