Information for 6-TGTGTRTTTTGGC (Motif 6)

A C G T A C T G A C G T A C T G A C G T C T G A A C G T A C G T A G C T A C G T A T C G A T C G A T G C
Reverse Opposite:
A T C G A T G C A T G C C G T A C T G A C G T A T C G A A G C T C G T A G T A C G T C A A G T C C G T A
p-value:1e-16
log p-value:-3.763e+01
Information Content per bp:1.832
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.1 +/- 23.0bp
Average Position of motif in Background65.8 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--TGTGTRTTTTGGC-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T C T G A A C G T A C G T A G C T A C G T A T C G A T C G A T G C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTGTRTTTTGGC
TGTGGATTNNN--
 A C G T A C T G A C G T A C T G A C G T C T G A A C G T A C G T A G C T A C G T A T C G A T C G A T G C
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTGTRTTTTGGC
TGTTTATTT----
 A C G T A C T G A C G T A C T G A C G T C T G A A C G T A C G T A G C T A C G T A T C G A T C G A T G C
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGTGTRTTTTGGC
GAATGTTTGTTT----
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T C T G A A C G T A C G T A G C T A C G T A T C G A T C G A T G C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGTGTRTTTTGGC
NNTGTGGATTSS---
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T C T G A A C G T A C G T A G C T A C G T A T C G A T C G A T G C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTRTTTTGGC---
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C T G A C G T A C T G A C G T C T G A A C G T A C G T A G C T A C G T A T C G A T C G A T G C A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTGTRTTTTGGC--
NNTTTNTTTTNGNNN
 A C G T A C T G A C G T A C T G A C G T C T G A A C G T A C G T A G C T A C G T A T C G A T C G A T G C A C G T A C G T
C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTRTTTTGGC--
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G A C G T A C T G A C G T C T G A A C G T A C G T A G C T A C G T A T C G A T C G A T G C A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Foxq1/MA0040.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGTGTRTTTTGGC
TATTGTTTATT-----
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T C T G A A C G T A C G T A G C T A C G T A T C G A T C G A T G C
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTGTRTTTTGGC
TGTTTACTTT---
 A C G T A C T G A C G T A C T G A C G T C T G A A C G T A C G T A G C T A C G T A T C G A T C G A T G C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T