Information for 4-ATTTGGCAAT (Motif 5)

G T C A A G C T A G C T C A G T C T A G A C T G G T A C G T C A G T C A C A G T
Reverse Opposite:
G T C A C A G T C A G T C A T G T G A C G A T C G T C A T C G A T C G A C A G T
p-value:1e-16
log p-value:-3.788e+01
Information Content per bp:1.657
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif8.92%
Number of Background Sequences with motif1356.6
Percentage of Background Sequences with motif2.85%
Average Position of motif in Targets51.8 +/- 22.7bp
Average Position of motif in Background50.5 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:ATTTGGCAAT
NNTTGGCANN
 G T C A A G C T A G C T C A G T C T A G A C T G G T A C G T C A G T C A C A G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:ATTTGGCAAT
-CTTGGCAA-
 G T C A A G C T A G C T C A G T C T A G A C T G G T A C G T C A G T C A C A G T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:ATTTGGCAAT
-NTTGGCANN
 G T C A A G C T A G C T C A G T C T A G A C T G G T A C G T C A G T C A C A G T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.77
Offset:2
Orientation:forward strand
Alignment:ATTTGGCAAT
--TTGGCA--
 G T C A A G C T A G C T C A G T C T A G A C T G G T A C G T C A G T C A C A G T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGGCAAT
NATTGTGCAAT
 A C G T G T C A A G C T A G C T C A G T C T A G A C T G G T A C G T C A G T C A C A G T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATTTGGCAAT
GGTTGGCAT-
 G T C A A G C T A G C T C A G T C T A G A C T G G T A C G T C A G T C A C A G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGGCAAT--
ANATTTTTGCAANTN
 A C G T A C G T A C G T G T C A A G C T A G C T C A G T C T A G A C T G G T A C G T C A G T C A C A G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

CEBPD/MA0836.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATTTGGCAAT
ATTGCGCAAT
 G T C A A G C T A G C T C A G T C T A G A C T G G T A C G T C A G T C A C A G T
T C G A A C G T A C G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATTTGGCAAT
ARNTGACA--
 G T C A A G C T A G C T C A G T C T A G A C T G G T A C G T C A G T C A C A G T
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATTTGGCAAT
ATTGCGCAAT
 G T C A A G C T A G C T C A G T C T A G A C T G G T A C G T C A G T C A C A G T
T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T