Information for 5-GCCTGTAGACCACACT (Motif 5)

C T A G A G T C A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C A T G C C G T A A G T C C G T A A G T C C G A T
Reverse Opposite:
C G T A A C T G A C G T A C T G A C G T A T C G A T C G A G C T A G T C A C G T T C G A A G T C C G T A C T A G C T A G A G T C
p-value:1e-14
log p-value:-3.226e+01
Information Content per bp:1.916
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 11.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GCCTGTAGACCACACT-
-----GCGACCACACTG
 C T A G A G T C A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C A T G C C G T A A G T C C G T A A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCCTGTAGACCACACT-
-----NWAACCACADNN
 C T A G A G T C A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C A T G C C G T A A G T C C G T A A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCCTGTAGACCACACT
-----NAAACCACAG-
 C T A G A G T C A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C A T G C C G T A A G T C C G T A A G T C C G A T
A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCCTGTAGACCACACT---
--CATAAGACCACCATTAC
 C T A G A G T C A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C A T G C C G T A A G T C C G T A A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCCTGTAGACCACACT-
------AAACCACAGAN
 C T A G A G T C A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C A T G C C G T A A G T C C G T A A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCCTGTAGACCACACT
------AAACCACANN
 C T A G A G T C A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C A T G C C G T A A G T C C G T A A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCCTGTAGACCACACT
------AAACCACAGC
 C T A G A G T C A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C A T G C C G T A A G T C C G T A A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCCTGTAGACCACACT--
------GGACCACCCACG
 C T A G A G T C A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C A T G C C G T A A G T C C G T A A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GCCTGTAGACCACACT
------AAACCGCAAA
 C T A G A G T C A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C A T G C C G T A A G T C C G T A A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GCCTGTAGACCACACT---
-------GGCCACACCCAN
 C T A G A G T C A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C A T G C C G T A A G T C C G T A A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G