Information for 4-GCACTGCCAAGGWGGA (Motif 4)

A T C G A T G C G T C A T G A C C G A T T A C G T A G C G A T C C G T A C T G A T A C G T C A G C G A T T A C G A T C G G T C A
Reverse Opposite:
A C G T A T G C A G T C G C T A A G T C A T G C G A C T C G A T C A T G A C T G A G T C G C T A A C T G C A G T T A C G A T G C
p-value:1e-15
log p-value:-3.565e+01
Information Content per bp:1.663
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif45.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets44.8 +/- 22.5bp
Average Position of motif in Background49.5 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCACTGCCAAGGWGGA
--CGTGCCAAG-----
 A T C G A T G C G T C A T G A C C G A T T A C G T A G C G A T C C G T A C T G A T A C G T C A G C G A T T A C G A T C G G T C A
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCACTGCCAAGGWGGA
----TGCCAA------
 A T C G A T G C G T C A T G A C C G A T T A C G T A G C G A T C C G T A C T G A T A C G T C A G C G A T T A C G A T C G G T C A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCACTGCCAAGGWGGA
---TTGCCAAG-----
 A T C G A T G C G T C A T G A C C G A T T A C G T A G C G A T C C G T A C T G A T A C G T C A G C G A T T A C G A T C G G T C A
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCACTGCCAAGGWGGA
--GGTGCCAAGT----
 A T C G A T G C G T C A T G A C C G A T T A C G T A G C G A T C C G T A C T G A T A C G T C A G C G A T T A C G A T C G G T C A
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:GCACTGCCAAGGWGGA---
---------GGGAGGACNG
 A T C G A T G C G T C A T G A C C G A T T A C G T A G C G A T C C G T A C T G A T A C G T C A G C G A T T A C G A T C G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCACTGCCAAGGWGGA
----TGCCCNGGGGCA
 A T C G A T G C G T C A T G A C C G A T T A C G T A G C G A T C C G T A C T G A T A C G T C A G C G A T T A C G A T C G G T C A
A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GCACTGCCAAGGWGGA----
----TGCCAAAATAAACANN
 A T C G A T G C G T C A T G A C C G A T T A C G T A G C G A T C C G T A C T G A T A C G T C A G C G A T T A C G A T C G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GCACTGCCAAGGWGGA
----TGCCCTNGGGCA
 A T C G A T G C G T C A T G A C C G A T T A C G T A G C G A T C C G T A C T G A T A C G T C A G C G A T T A C G A T C G G T C A
A C G T A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GCACTGCCAAGGWGGA
----TGCCCTNGGGCA
 A T C G A T G C G T C A T G A C C G A T T A C G T A G C G A T C C G T A C T G A T A C G T C A G C G A T T A C G A T C G G T C A
A C G T A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.49
Offset:11
Orientation:reverse strand
Alignment:GCACTGCCAAGGWGGA-
-----------GTGGAT
 A T C G A T G C G T C A T G A C C G A T T A C G T A G C G A T C C G T A C T G A T A C G T C A G C G A T T A C G A T C G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T