Information for 8-CGTGCAGCAT (Motif 34)

A T G C A C T G A C G T A C T G A G T C C G T A A C T G A G T C C T G A C G A T
Reverse Opposite:
C G T A A G C T C T A G A G T C A C G T A C T G A G T C C G T A A G T C A T C G
p-value:1e-7
log p-value:-1.618e+01
Information Content per bp:1.905
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif71.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets49.9 +/- 26.4bp
Average Position of motif in Background47.7 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGTGCAGCAT
RTACGTGC-----
 A C G T A C G T A C G T A T G C A C T G A C G T A C T G A G T C C G T A A C T G A G T C C T G A C G A T
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGTGCAGCAT
GGACGTGC-----
 A C G T A C G T A C G T A T G C A C T G A C G T A C T G A G T C C G T A A C T G A G T C C T G A C G A T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CGTGCAGCAT----
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A T G C A C T G A C G T A C T G A G T C C G T A A C T G A G T C C T G A C G A T A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGTGCAGCAT
TACGTGCV----
 A C G T A C G T A T G C A C T G A C G T A C T G A G T C C G T A A C T G A G T C C T G A C G A T
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CGTGCAGCAT
GGGTACGTGC-----
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C G T A C T G A G T C C G T A A C T G A G T C C T G A C G A T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGTGCAGCAT-
-TTGCAACATN
 A T G C A C T G A C G T A C T G A G T C C G T A A C T G A G T C C T G A C G A T A C G T
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CGTGCAGCAT
NNCGCGTGNN----
 A C G T A C G T A C G T A C G T A T G C A C T G A C G T A C T G A G T C C G T A A C T G A G T C C T G A C G A T
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGTGCAGCAT
TTGCGTGCVA---
 A C G T A C G T A C G T A T G C A C T G A C G T A C T G A G T C C G T A A C T G A G T C C T G A C G A T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGTGCAGCAT
TGCGTG------
 A C G T A C G T A T G C A C T G A C G T A C T G A G T C C G T A A C T G A G T C C T G A C G A T
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGTGCAGCAT
----CAGCC-
 A T G C A C T G A C G T A C T G A G T C C G T A A C T G A G T C C T G A C G A T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T