Information for 22-CAGAGCCGGGGGAACT (Motif 31)

T A G C C T G A T A C G T C G A A T C G T A G C G A T C C T A G T A C G T C A G T C A G T A C G T G C A T C G A T A G C C G A T
Reverse Opposite:
G C T A A T C G A G C T A C G T A T G C A G T C A G T C A T G C G A T C C T A G A T C G T A G C A G C T A T G C G A C T A T C G
p-value:1e-7
log p-value:-1.754e+01
Information Content per bp:1.479
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.8 +/- 22.3bp
Average Position of motif in Background30.7 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAGAGCCGGGGGAACT
CACAGCGGGGGGTC--
 T A G C C T G A T A C G T C G A A T C G T A G C G A T C C T A G T A C G T C A G T C A G T A C G T G C A T C G A T A G C C G A T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGCCGGGGGAACT
NCGCAGCGGGGGGTC--
 A C G T T A G C C T G A T A C G T C G A A T C G T A G C G A T C C T A G T A C G T C A G T C A G T A C G T G C A T C G A T A G C C G A T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGAGCCGGGGGAACT
CACAGCAGGGGG----
 T A G C C T G A T A C G T C G A A T C G T A G C G A T C C T A G T A C G T C A G T C A G T A C G T G C A T C G A T A G C C G A T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CAGAGCCGGGGGAACT
-------TGGGGA---
 T A G C C T G A T A C G T C G A A T C G T A G C G A T C C T A G T A C G T C A G T C A G T A C G T G C A T C G A T A G C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGCCGGGGGAACT
NCNCAGCGGGGGGTC--
 A C G T T A G C C T G A T A C G T C G A A T C G T A G C G A T C C T A G T A C G T C A G T C A G T A C G T G C A T C G A T A G C C G A T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGCCGGGGGAACT
DCHCAGCAGGRGGCC--
 A C G T T A G C C T G A T A C G T C G A A T C G T A G C G A T C C T A G T A C G T C A G T C A G T A C G T G C A T C G A T A G C C G A T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGAGCCGGGGGAACT
-ATTGCCTCAGGCAAT
 T A G C C T G A T A C G T C G A A T C G T A G C G A T C C T A G T A C G T C A G T C A G T A C G T G C A T C G A T A G C C G A T
A C G T C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGAGCCGGGGGAACT
-GGGGGCGGGGC----
 T A G C C T G A T A C G T C G A A T C G T A G C G A T C C T A G T A C G T C A G T C A G T A C G T G C A T C G A T A G C C G A T
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGAGCCGGGGGAACT--
-ANTNCCGGGGGGAANTT
 T A G C C T G A T A C G T C G A A T C G T A G C G A T C C T A G T A C G T C A G T C A G T A C G T G C A T C G A T A G C C G A T A C G T A C G T
A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGAGCCGGGGGAACT
---NGCCTGAGGCN--
 T A G C C T G A T A C G T C G A A T C G T A G C G A T C C T A G T A C G T C A G T C A G T A C G T G C A T C G A T A G C C G A T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T