Information for 2-GCCTCCAGGGGGAGCC (Motif 2)

A C T G T A G C A G T C G C A T A T G C A G T C G T C A A C T G T C A G C A T G C T A G T C A G G T C A C T A G T A G C G A T C
Reverse Opposite:
C A T G A T C G A G T C C A G T A G T C A G T C G T A C A G T C A G T C A C G T A C T G A T C G C G T A A C T G A T C G G T A C
p-value:1e-17
log p-value:-3.949e+01
Information Content per bp:1.678
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.97%
Number of Background Sequences with motif89.7
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets53.0 +/- 27.0bp
Average Position of motif in Background47.7 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GCCTCCAGGGGGAGCC----
GCCASCAGGGGGCGCYVNNG
 A C T G T A G C A G T C G C A T A T G C A G T C G T C A A C T G T C A G C A T G C T A G T C A G G T C A C T A G T A G C G A T C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GCCTCCAGGGGGAGCC-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C T G T A G C A G T C G C A T A T G C A G T C G T C A A C T G T C A G C A T G C T A G T C A G G T C A C T A G T A G C G A T C A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCCAGGGGGAGCC--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C T G T A G C A G T C G C A T A T G C A G T C G T C A A C T G T C A G C A T G C T A G T C A G G T C A C T A G T A G C G A T C A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCAGGGGGAGCC
NCCCCCCCGGGGGGN--
 A C G T A C T G T A G C A G T C G C A T A T G C A G T C G T C A A C T G T C A G C A T G C T A G T C A G G T C A C T A G T A G C G A T C
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCCTCCAGGGGGAGCC
CCCCCCCGGGGGNN--
 A C T G T A G C A G T C G C A T A T G C A G T C G T C A A C T G T C A G C A T G C T A G T C A G G T C A C T A G T A G C G A T C
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCAGGGGGAGCC
ACCCCCCCGGGGGGN--
 A C G T A C T G T A G C A G T C G C A T A T G C A G T C G T C A A C T G T C A G C A T G C T A G T C A G G T C A C T A G T A G C G A T C
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCCTCCAGGGGGAGCC
GTCCCCAGGGGA----
 A C T G T A G C A G T C G C A T A T G C A G T C G T C A A C T G T C A G C A T G C T A G T C A G G T C A C T A G T A G C G A T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCAGGGGGAGCC
TGCCCTNAGGGCA----
 A C G T A C T G T A G C A G T C G C A T A T G C A G T C G T C A A C T G T C A G C A T G C T A G T C A G G T C A C T A G T A G C G A T C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCAGGGGGAGCC
TGCCCTNAGGGCA----
 A C G T A C T G T A G C A G T C G C A T A T G C A G T C G T C A A C T G T C A G C A T G C T A G T C A G G T C A C T A G T A G C G A T C
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCTCCAGGGGGAGCC-
ANTNCCGGGGGGAANTT
 A C T G T A G C A G T C G C A T A T G C A G T C G T C A A C T G T C A G C A T G C T A G T C A G G T C A C T A G T A G C G A T C A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T